ggKbase home page

qh_8_scaffold_5005

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_5005_1
unknown

Not on your lists

1..201
DNA (201bp) protein (67aa)

This feature has no annotations

qh_8_scaffold_5005_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

918..1919
DNA (1002bp) protein (334aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KZK1_HALAR
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EMA26273.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
hypothetical protein
qh_8_scaffold_5005_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1920..2885)
DNA (966bp) protein (322aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DTL3_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ELZ37997.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum s
alcohol dehydrogenase GroES domain protein
qh_8_scaffold_5005_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2917..3123)
DNA (207bp) protein (69aa)
oxidoreductase (homolog to zinc-containing alcohol dehydrogenase) (EC:1.1.1.-)
Oxidoreductase (Homolog to zinc-containing alcohol dehydrogenase) {ECO:0000313|EMBL:CCQ37400.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ37400.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria;
Oxidoreductase (Homolog to zinc-containing alcohol dehydrogenase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSP6_NATM8
qh_8_scaffold_5005_5
unknown

Not on your lists

comp(3423..3674)
DNA (252bp) protein (84aa)

This feature has no annotations

qh_8_scaffold_5005_6
unknown

Not on your lists

comp(4032..4226)
DNA (195bp) protein (65aa)

This feature has no annotations

qh_8_scaffold_5005_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4357..5646
DNA (1290bp) protein (430aa)
UPF0272 protein C475_16064 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIR4_9EURY
UPF0272 protein C475_16064 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
hypothetical protein
qh_8_scaffold_5005_8
unknown

Not on your lists

5768..6385
DNA (618bp) protein (206aa)

This feature has no annotations

qh_8_scaffold_5005_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6382..6798
DNA (417bp) protein (139aa)
DNA repair and recombination protein RadB n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FB92_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:ELZ57220.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
radB; DNA repair and recombination protein RadB
qh_8_scaffold_5005_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6738..6950
DNA (213bp) protein (71aa)
DNA repair and recombination protein RadB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA2_NATPD
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qh_8_scaffold_5005_11
unknown

Not on your lists

6977..7333
DNA (357bp) protein (119aa)

This feature has no annotations

qh_8_scaffold_5005_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7334..7660)
DNA (327bp) protein (109aa)
PemK family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM40_NATPD
hypothetical protein
PemK family protein {ECO:0000313|EMBL:CAI50825.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_8_scaffold_5005_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7664..8032)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM41_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI50824.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_8_scaffold_5005_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8191..9336)
DNA (1146bp) protein (382aa)
CBS domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ0_NATM8
cbs1; CBS domain protein
CBS domain protein {ECO:0000313|EMBL:CCQ37405.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qh_8_scaffold_5005_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9419..9718
DNA (300bp) protein (100aa)
Lycopene cyclase domain-containing protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WYG4_9EURY
lycopene cyclase domain-containing protein
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:EMA27200.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma la
qh_8_scaffold_5005_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9784..10599
DNA (816bp) protein (272aa)
short-chain dehydrogenase id=24644252 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dehydrogenase {ECO:0000313|EMBL:ERH08484.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fabG; oxidoreductase
qh_8_scaffold_5005_trna_1
unknown

Not on your lists

comp(10658..10732)
DNA (75bp)
transferRNA
qh_8_scaffold_5005_17
unknown

Not on your lists

10887..12008
DNA (1122bp) protein (374aa)

This feature has no annotations

qh_8_scaffold_5005_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12108..13055
DNA (948bp) protein (316aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Anthranilate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRPD_NATPD
Displaying 19 items

View Taxonomy