ggKbase home page

qh_8_scaffold_577

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_577_1
unknown

Not on your lists

3..128
DNA (126bp) protein (42aa)

This feature has no annotations

qh_8_scaffold_577_2
unknown

Not on your lists

comp(738..1556)
DNA (819bp) protein (273aa)

This feature has no annotations

qh_8_scaffold_577_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1745..2923)
DNA (1179bp) protein (393aa)
Major facilitator superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY85_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ27573.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
major facilitator superfamily protein
qh_8_scaffold_577_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3099..4799)
DNA (1701bp) protein (567aa)
thiamine pyrophosphate protein domain protein TPP-binding protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=24613560 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ESP90193.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candida
thiamine pyrophosphate protein domain protein TPP-binding protein
qh_8_scaffold_577_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5511..6122
DNA (612bp) protein (204aa)
Transposase IS4 family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LRB1_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA36001.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
ISH3-type transposase
qh_8_scaffold_577_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6277..6402
DNA (126bp) protein (42aa)
Aldehyde dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WUI0_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:KDE57305.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
aldehyde dehydrogenase
qh_8_scaffold_577_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6531..7430
DNA (900bp) protein (300aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9A6_9EURY
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ELZ31302.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
hypothetical protein
qh_8_scaffold_577_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7572..8276
DNA (705bp) protein (235aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) n=2 Tax=Clostridiales RepID=D4M4F7_9FIRM
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CBL26119.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
qh_8_scaffold_577_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8334..9503)
DNA (1170bp) protein (390aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C902_SPHTD
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
inner-membrane translocator
qh_8_scaffold_577_10
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9500..10366)
DNA (867bp) protein (289aa)
Inner-membrane translocator n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK71_SYNFM
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABK17823.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Sy
qh_8_scaffold_577_11
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10377..11639)
DNA (1263bp) protein (421aa)
Leu/Ile/Val-binding protein (Fragment) n=1 Tax=Haloarcula sp. D1 RepID=Q330N2_9EURY
Leu/Ile/Val-binding protein {ECO:0000313|EMBL:AAQ79815.1}; Flags: Fragment;; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
putative branched-chain amino acid ABC transporter substrate-binding protein
qh_8_scaffold_577_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11763..12902)
DNA (1140bp) protein (380aa)
Gentisate 1,2-dioxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D044_9EURY
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ELZ28022.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
phdI; gentisate 1,2-dioxygenase
qh_8_scaffold_577_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12962..13135)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQR9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01602.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_8_scaffold_577_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13342..13719)
DNA (378bp) protein (126aa)
Putative 4-hydroxybenzoyl CoA thioesterase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D725_9EURY
Putative 4-hydroxybenzoyl CoA thioesterase {ECO:0000313|EMBL:ELZ31301.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
hypothetical protein
qh_8_scaffold_577_15
unknown

Not on your lists

14613..14768
DNA (156bp) protein (52aa)

This feature has no annotations

qh_8_scaffold_577_16
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15327..16109)
DNA (783bp) protein (261aa)
Acetyl-CoA synthetase (ADP-forming) beta subunit n=1 Tax=Haloarcula sp. D1 RepID=Q330N5_9EURY
Acetyl-CoA synthetase (ADP-forming) beta subunit {ECO:0000313|EMBL:AAQ79812.1}; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
hypothetical protein
qh_8_scaffold_577_17
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16102..17469)
DNA (1368bp) protein (456aa)
Acetyl-CoA synthetase (ADP-forming) alpha subunit n=1 Tax=Haloarcula sp. D1 RepID=Q330N6_9EURY
Acetyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:AAQ79811.1}; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
hypothetical protein
qh_8_scaffold_577_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17567..18319
DNA (753bp) protein (251aa)
Putative branched-chain amino acid ABC transporter, permease protein id=2902208 bin=GWC2_Methylomirabilis_70_16 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_R
amino acid ABC transporter ATP-binding protein
qh_8_scaffold_577_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18423..19829
DNA (1407bp) protein (469aa)
Sodium symporter transmembrane region n=2 Tax=Haloarcula RepID=Q5UZ86_HALMA
sodium symporter transmembrane protein
Sodium symporter transmembrane protein {ECO:0000313|EMBL:EMA14806.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula si
qh_8_scaffold_577_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19952..21496)
DNA (1545bp) protein (515aa)
AMP-dependent synthetase and ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZJ0_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ28018.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
hypothetical protein rbh
qh_8_scaffold_577_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21622..21786)
DNA (165bp) protein (55aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXS6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ28016.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
qh_8_scaffold_577_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21762..22322)
DNA (561bp) protein (187aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXS6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ28016.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
hypothetical protein
qh_8_scaffold_577_23
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22569..22754)
DNA (186bp) protein (62aa)
Hexapeptide repeat-containing transferase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGP2_9EURY
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:EMA07503.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denit
Displaying 23 items

View Taxonomy