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qh_8_scaffold_9140

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_9140_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..871)
DNA (870bp) protein (290aa)
Phosphate/phosphonate ABC transporter substrate-binding protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXL7_9EURY
Phosphate/phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDK40616.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
phosphate/phosphonate ABC transporter substrate-binding protein
qh_8_scaffold_9140_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1004..1603)
DNA (600bp) protein (200aa)
udg1; uracil-DNA glycosylase (EC:3.2.2.27)
Uracil-DNA glycosylase {ECO:0000313|EMBL:CCQ37934.1}; EC=3.2.2.27 {ECO:0000313|EMBL:CCQ37934.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Uracil-DNA glycosylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTV9_NATM8
qh_8_scaffold_9140_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1628..2239)
DNA (612bp) protein (204aa)
UPF0215 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP6_NATPD
hypothetical protein
UPF0215 protein NP_0086A {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_8_scaffold_9140_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2413..2919
DNA (507bp) protein (169aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI48136.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48136.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP4_NATPD
signal-transducing histidine kinase
qh_8_scaffold_9140_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2945..3556
DNA (612bp) protein (204aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 8 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP3_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI48137.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qh_8_scaffold_9140_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3591..3740)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Natronomonas RepID=RL40_NATPD
rpl40e; 50S ribosomal protein L40e
50S ribosomal protein L40e {ECO:0000255|HAMAP-Rule:MF_00788}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qh_8_scaffold_9140_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3889..4386)
DNA (498bp) protein (166aa)
Probable ribosome biogenesis protein C448_08904 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIV7_HALMO
Probable ribosome biogenesis protein C448_08904 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
UPF0293 family protein
qh_8_scaffold_9140_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4562..4897
DNA (336bp) protein (112aa)
DUF1486 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQD7_NATM8
DUF1486 family protein
DUF1486 family protein {ECO:0000313|EMBL:CCQ36295.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qh_8_scaffold_9140_9
unknown

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5039..5272
DNA (234bp) protein (78aa)

This feature has no annotations

qh_8_scaffold_9140_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5275..5913)
DNA (639bp) protein (213aa)
serS; serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ92_NATM8
Displaying 10 items

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