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qh_8_scaffold_12330

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_12330_1
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
50S ribosomal protein L2 n=1 Tax=Salisaeta longa RepID=UPI0003B791FF
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
qh_8_scaffold_12330_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(320..619)
DNA (300bp) protein (100aa)
rplW; 50S ribosomal protein L23
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24658960 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_12330_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(721..1188)
DNA (468bp) protein (156aa)
50S ribosomal protein L4 n=1 Tax=Salisaeta longa RepID=UPI0003B69FCC
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_8_scaffold_12330_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1425..2063)
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=1 Tax=Salisaeta longa RepID=UPI0003B4A252
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_8_scaffold_12330_5
unknown

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comp(2107..2655)
DNA (549bp) protein (183aa)

This feature has no annotations

qh_8_scaffold_12330_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2689..3000)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Salisaeta longa RepID=UPI0003B475B2
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_12330_7
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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comp(3085..3198)
DNA (114bp) protein (38aa)
elongation factor Tu n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B53995
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales;
Displaying 7 items

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