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qh_8_scaffold_1223

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1223_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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420..956
DNA (537bp) protein (179aa)
Peroxiredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D512_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELZ29938.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
peroxiredoxin
qh_8_scaffold_1223_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1218..1496
DNA (279bp) protein (93aa)
Peroxiredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D512_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EJN60893.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peroxiredoxin
qh_8_scaffold_1223_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1587..2405)
DNA (819bp) protein (273aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZL8_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA49870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
qh_8_scaffold_1223_4

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2561..3151
DNA (591bp) protein (197aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX02_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS06778.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
acetyltransferase
qh_8_scaffold_1223_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3179..3577)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_8_scaffold_1223_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3645..4136)
DNA (492bp) protein (164aa)
trpB2; probable tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=halophilic archaeon J07HX5 RepID=U1PAV6_9EURY
Tryptophan synthase beta chain {ECO:0000313|EMBL:ERG89231.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_8_scaffold_1223_7
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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4406..4741
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K6Z4_THENN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM22728.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain ATCC 49049 / DSM
qh_8_scaffold_1223_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4940..5851
DNA (912bp) protein (304aa)
RIO kinase 2 protein {ECO:0000313|EMBL:ERJ04708.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ERJ04708.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhab
Serine/threonine protein kinase n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D3H7_9EURY
serine/threonine protein kinase
qh_8_scaffold_1223_9

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comp(6064..7953)
DNA (1890bp) protein (630aa)
Putative anaerobic dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXE8_9ARCH
Putative anaerobic dehydrogenase {ECO:0000313|EMBL:ESS06948.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
molybdopterin oxidoreductase
qh_8_scaffold_1223_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8272..10041
DNA (1770bp) protein (590aa)
Metallophosphoesterase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJJ9_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELY61586.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
DNA double-strand break repair protein Mre11
qh_8_scaffold_1223_11
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10051..12735
DNA (2685bp) protein (895aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8X5_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema
DNA double-strand break repair rad50 ATPase
qh_8_scaffold_1223_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12796..13170)
DNA (375bp) protein (125aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Halarchaeum acidiphilum RepID=U2YRI5_9EURY
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:GAD51317.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum ac
deoxyuridine 5'-triphosphate nucleotidohydrolase
qh_8_scaffold_1223_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13685..15655
DNA (1971bp) protein (657aa)
Aconitate hydratase {ECO:0000313|EMBL:EMA44058.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EMA44058.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
acnB; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD8_9EURY
qh_8_scaffold_1223_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16218..17387
DNA (1170bp) protein (390aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase 8 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3Z9_9EURY
Acetyl-CoA C-acyltransferase 8 {ECO:0000313|EMBL:EMA39090.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
qh_8_scaffold_1223_15
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17384..17548
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VL08_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY37751.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qh_8_scaffold_1223_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17555..17791
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50641.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_8_scaffold_1223_17
unknown

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comp(18272..18394)
DNA (123bp) protein (41aa)

This feature has no annotations

qh_8_scaffold_1223_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18513..20096)
DNA (1584bp) protein (528aa)
Acetolactate synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRK8_HALMO
Acetolactate synthase {ECO:0000313|EMBL:EMA48362.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;
acetolactate synthase
qh_8_scaffold_1223_19
unknown

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20187..20492
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 19 items

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