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qh_8_scaffold_1169

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1169_1
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1814)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVQ2_9CLOT
ATPase component of ABC-type transport system {ECO:0000313|EMBL:ETP73465.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacteriu
cobalt ABC transporter ATP-binding protein
qh_8_scaffold_1169_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1811..2587)
DNA (777bp) protein (259aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:ABG04844.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
qh_8_scaffold_1169_3

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comp(2584..3279)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02367.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
signal transduction histidine kinase LytS
qh_8_scaffold_1169_4
unknown

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3836..4675
DNA (840bp) protein (280aa)

This feature has no annotations

qh_8_scaffold_1169_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5079..6056)
DNA (978bp) protein (326aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1132509 species="Archaea; E
Protein pelota homolog n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTW4_9EURY
translation release factor pelota
qh_8_scaffold_1169_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6372..7259)
DNA (888bp) protein (296aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
qh_8_scaffold_1169_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7306..8253)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37679.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_8_scaffold_1169_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8278..9174)
DNA (897bp) protein (299aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=931277 species="Archaea; Euryar
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIW5_HALMO
qh_8_scaffold_1169_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9407..10798
DNA (1392bp) protein (464aa)
Sodium/calcium exchanger membrane subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW2_9EURY
Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:EMA44928.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sodium/calcium exchanger membrane subunit
qh_8_scaffold_1169_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11034..12194
DNA (1161bp) protein (387aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
qh_8_scaffold_1169_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12287..13432
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPE0_9EURY
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
qh_8_scaffold_1169_12
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13739..13912
DNA (174bp) protein (58aa)
sec61c; preprotein translocase Sec61 subunit gamma; K07342 protein transport protein SEC61 subunit gamma and related proteins id=24620965 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1238427 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
qh_8_scaffold_1169_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13914..14351
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=2 Tax=Halococcus RepID=M0MJL6_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NusG antitermination factor
qh_8_scaffold_1169_14
unknown

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comp(15150..15515)
DNA (366bp) protein (122aa)

This feature has no annotations

qh_8_scaffold_1169_15
unknown

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15882..16085
DNA (204bp) protein (68aa)

This feature has no annotations

qh_8_scaffold_1169_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16112..17071
DNA (960bp) protein (320aa)
PHP-associated domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFI1_9EURY
polymerase/histidinol phosphatase-like protein
PHP-associated domain containing protein {ECO:0000313|EMBL:ERJ06477.1}; Polymerase/histidinol phosphatase-like protein {ECO:0000313|EMBL:CCQ34358.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Hal
qh_8_scaffold_1169_17
unknown

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17093..17209
DNA (117bp) protein (39aa)

This feature has no annotations

qh_8_scaffold_1169_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17182..17694)
DNA (513bp) protein (171aa)
CinA domain protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIV4_HALMO
CinA domain protein {ECO:0000313|EMBL:EMA45601.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
CinA domain protein
qh_8_scaffold_1169_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17889..18989
DNA (1101bp) protein (367aa)
Aspartate transaminase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MMD9_HALMO
Aspartate transaminase {ECO:0000313|EMBL:EMA45600.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.
class I and II aminotransferase
qh_8_scaffold_1169_20
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19194..20246
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GU37_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE04281.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
qh_8_scaffold_1169_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20391..21752
DNA (1362bp) protein (454aa)
tpa07; transport ATPase 7 ( substrate arsenite) (EC:3.6.3.-)
Arsenical pump-driving ATPase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFB0_HALVA
Arsenical pump-driving ATPase {ECO:0000313|EMBL:EMA07023.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
qh_8_scaffold_1169_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21904..22989
DNA (1086bp) protein (362aa)
Flavin-containing amine-oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L5_9EURY
Flavin-containing amine-oxidoreductase {ECO:0000313|EMBL:EMA52461.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
NAD/fad-dependent oxidoreductase
Displaying 22 items

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