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qh_8_scaffold_1108

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1108_1
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..108)
DNA (108bp) protein (36aa)
Cold-shock DNA-binding domain protein n=2 Tax=Halobacteriaceae RepID=F8D403_HALXS
cold shock protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EMA31720.1}; Flags: Fragment;; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source=
qh_8_scaffold_1108_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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402..1412
DNA (1011bp) protein (337aa)
Polysaccharide deacetylase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05205.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Polysaccharide deacetylase
qh_8_scaffold_1108_3
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1409..2200
DNA (792bp) protein (264aa)
Methionyl-tRNA formyltransferase-like protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHQ3_9EURY
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:AHG03230.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
methionyl-tRNA formyltransferase
qh_8_scaffold_1108_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2294..2719)
DNA (426bp) protein (142aa)
Fjo21 n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HN81_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR52137.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qh_8_scaffold_1108_trna_2
unknown

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comp(2858..2931)
DNA (74bp)
transferRNA
qh_8_scaffold_1108_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2992..3567)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HHA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ83173.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qh_8_scaffold_1108_trna_1
unknown

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comp(3895..3967)
DNA (73bp)
transferRNA
qh_8_scaffold_1108_6
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4050..4544
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GPN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ72839.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
qh_8_scaffold_1108_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4645..6603
DNA (1959bp) protein (653aa)
ABC-type transport system ATP-binding/permease protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HMT2_9EURY
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:ESP89239.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobon
multidrug ABC transporter ATPase/permease
qh_8_scaffold_1108_8
unknown

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6760..7167
DNA (408bp) protein (136aa)

This feature has no annotations

qh_8_scaffold_1108_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7230..8120
DNA (891bp) protein (297aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24614157 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1324957 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
qh_8_scaffold_1108_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8084..8383
DNA (300bp) protein (100aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24614157 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1324957 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
qh_8_scaffold_1108_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8737..8919
DNA (183bp) protein (61aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus
phosphodiesterase, MJ0936 family protein id=24614160 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
phosphodiesterase, MJ0936 family
qh_8_scaffold_1108_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8983..9135)
DNA (153bp) protein (51aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gapA; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (EC:1.2.1.59) id=24614162 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
qh_8_scaffold_1108_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9132..9965)
DNA (834bp) protein (278aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HEW2_9EURY
glyceraldehyde-3-phosphate dehydrogenase, type II
qh_8_scaffold_1108_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10144..11097
DNA (954bp) protein (318aa)
leucyl aminopeptidase (aminopeptidase t) id=24614163 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Leucyl aminopeptidase {ECO:0000313|EMBL:ESP89246.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
leucyl aminopeptidase (aminopeptidase t)
Displaying 16 items

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