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qh_8_scaffold_7481

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_7481_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(73..207)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase, subunit p (EC:2.7.7.6); K03059 DNA-directed RNA polymerase subunit P [EC:2.7.7.6] id=24613828 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit p (EC:2.7.7.6)
qh_8_scaffold_7481_2

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comp(226..522)
DNA (297bp) protein (99aa)
50S ribosomal protein L37Ae n=1 Tax=halophilic archaeon DL31 RepID=G2MKG2_9ARCH
50S ribosomal protein L37
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_8_scaffold_7481_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(666..1337)
DNA (672bp) protein (224aa)
hypothetical protein id=24613826 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89685.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_8_scaffold_7481_4

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comp(1393..2511)
DNA (1119bp) protein (373aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y4A9_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS05827.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_8_scaffold_7481_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2660..2869)
DNA (210bp) protein (70aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J2Q6_9EURY
qh_8_scaffold_7481_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2848..3816)
DNA (969bp) protein (323aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GSR8_HALVD
tRNA pseudouridine synthase D (TruD) superfamily protein
qh_8_scaffold_7481_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3816..4160)
DNA (345bp) protein (115aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1132509 species="Archaea; Euryarchaeota;
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSL0_9EURY
qh_8_scaffold_7481_8
unknown

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4360..4737
DNA (378bp) protein (126aa)

This feature has no annotations

qh_8_scaffold_7481_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4796..5512
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HTY0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ86569.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
qh_8_scaffold_7481_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5575..6036
DNA (462bp) protein (154aa)
deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] id=24613819 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1324957
deoxycytidine triphosphate deaminase
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