ggKbase home page

qh_8_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_129_1

Not on your lists

359..1690
DNA (1332bp) protein (444aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8V1_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS07502.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily protein
qh_8_scaffold_129_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1752..2918)
DNA (1167bp) protein (389aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycine/D-amino acid oxidase, deaminating
qh_8_scaffold_129_3
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3067..4062
DNA (996bp) protein (332aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BIH6_9EURY
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:ELZ10277.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia
ornithine cyclodeaminase/mu-crystallin
qh_8_scaffold_129_trna_1
unknown

Not on your lists

4166..4250
DNA (85bp)
transferRNA
qh_8_scaffold_129_4
unknown

Not on your lists

comp(4318..4446)
DNA (129bp) protein (43aa)

This feature has no annotations

qh_8_scaffold_129_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4584..5021)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMA5_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11313.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_8_scaffold_129_6
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5018..5578)
DNA (561bp) protein (187aa)
Transcriptional regulator n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E0N1_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ40583.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM
transcriptional regulator
qh_8_scaffold_129_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5813..6592)
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Natronococcus occultus SP4 RepID=L0K6K3_9EURY
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGB39989.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus o
qh_8_scaffold_129_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6750..7514
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBE8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA43097.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_8_scaffold_129_9
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7636..8847
DNA (1212bp) protein (404aa)
Bile acid-inducible L-carnitine dehydratase protein F n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AY53_NATA1
Bile acid-inducible L-carnitine dehydratase protein F {ECO:0000313|EMBL:ELZ03430.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natria
bile acid-inducible L-carnitine dehydratase protein F
qh_8_scaffold_129_10
unknown

Not on your lists

9053..9301
DNA (249bp) protein (83aa)

This feature has no annotations

qh_8_scaffold_129_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9491..10618
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0S5_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA51153.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
acyl-CoA dehydrogenase
qh_8_scaffold_129_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10631..11251
DNA (621bp) protein (207aa)
Phosphoglycolate phosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML27_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EMA45439.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
haloacid dehalogenase superfamily enzyme, subfamily IA
qh_8_scaffold_129_13
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11157..11570)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MDX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43962.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qh_8_scaffold_129_14

Not on your lists

11729..12436
DNA (708bp) protein (236aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGT0_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS07359.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qh_8_scaffold_129_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12533..14338
DNA (1806bp) protein (602aa)
Pas domain s-box n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML44_9EURY
Pas domain s-box {ECO:0000313|EMBL:EMA46083.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
multi-sensor signal transduction histidine kinase
qh_8_scaffold_129_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14544..15356
DNA (813bp) protein (271aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N208_9EURY
qh_8_scaffold_129_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15488..17200)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEP2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58534.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_8_scaffold_129_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17379..18104)
DNA (726bp) protein (242aa)
Uridine phosphorylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y2_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ28164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
S-methyl-5-thioadenosine phosphorylase
qh_8_scaffold_129_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18217..19848
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20205.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_8_scaffold_129_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20019..21239)
DNA (1221bp) protein (407aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP7_9EURY
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
peptidase
qh_8_scaffold_129_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21426..23216)
DNA (1791bp) protein (597aa)
Oligoendopeptidase F n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHY5_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EMA19435.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
oligoendopeptidase F
qh_8_scaffold_129_22
unknown

Not on your lists

23374..23793
DNA (420bp) protein (140aa)

This feature has no annotations

qh_8_scaffold_129_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23902..25371
DNA (1470bp) protein (490aa)
Peptidase M28 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5P8_HALXS
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEH36470.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM
qh_8_scaffold_129_24
unknown

Not on your lists

25598..25876
DNA (279bp) protein (93aa)

This feature has no annotations

qh_8_scaffold_129_25
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25972..26805)
DNA (834bp) protein (278aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:ELY61487.1}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:ELY61487.1};; tRNA pseudouridine(38-40) sy
tRNA pseudouridine synthase A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIR6_9EURY
Pseudouridine synthase I, TruA, alpha/beta domain protein
qh_8_scaffold_129_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26811..27068)
DNA (258bp) protein (86aa)
LD-carboxypeptidase id=24616751 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
LD-carboxypeptidase {ECO:0000313|EMBL:ESP87338.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
LD-carboxypeptidase
qh_8_scaffold_129_27
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(27070..28377)
DNA (1308bp) protein (436aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=543526 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQH4_HALTV
qh_8_scaffold_129_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28547..29218)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_8_scaffold_129_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29387..29749)
DNA (363bp) protein (121aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy