ggKbase home page

qh_8_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 58 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_19_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
Transposase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT46_9EURY
Transposase {ECO:0000313|EMBL:EFW92327.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
integrase catalytic subunit
qh_8_scaffold_19_2
unknown

Not on your lists

comp(178..630)
DNA (453bp) protein (151aa)

This feature has no annotations

qh_8_scaffold_19_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(743..1885)
DNA (1143bp) protein (381aa)
aspC2; pyridoxal phosphate-dependent aminotransferase (EC:2.6.1.-)
Class I and II aminotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQT6_HALMO
Class I and II aminotransferase {ECO:0000313|EMBL:EMA47713.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
qh_8_scaffold_19_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2040..3167)
DNA (1128bp) protein (376aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHJ0_9EURY
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELZ22765.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halo
transcriptional regulator
qh_8_scaffold_19_5
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3252..3452)
DNA (201bp) protein (67aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PC09_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELZ56131.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum
GCN5-related N-acetyltransferase
qh_8_scaffold_19_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3465..3851
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNY3_9EURY
Ribbon-helix-helix, copG family, UPF0175 family protein {ECO:0000313|EMBL:ERG96743.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sour
hypothetical protein
qh_8_scaffold_19_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3851..4183
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TY09_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY54965.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_8_scaffold_19_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4415..5980
DNA (1566bp) protein (522aa)
Replication factor C large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMD6_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
AAA ATPase
qh_8_scaffold_19_9
unknown

Not on your lists

6337..6549
DNA (213bp) protein (71aa)

This feature has no annotations

qh_8_scaffold_19_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6784..7686)
DNA (903bp) protein (301aa)
Polar amino acid ABC transporter permease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J456_9EURY
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:ESP90157.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
polar amino acid ABC transporter permease
qh_8_scaffold_19_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7679..8431)
DNA (753bp) protein (251aa)
Phosphonate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IH98_9EURY
ABC transporter {ECO:0000313|EMBL:AHG04395.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ABC transporter
qh_8_scaffold_19_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8428..9126)
DNA (699bp) protein (233aa)
Polar amino acid ABC transporter permease n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PBZ3_9EURY
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:EMA67526.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum ai
polar amino acid ABC transporter permease
qh_8_scaffold_19_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9151..9972)
DNA (822bp) protein (274aa)
Amino acid ABC transporter amino acid-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MHH4_HALMO
Amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:EMA45182.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
glnH3; amino acid ABC transporter amino acid-binding protein
qh_8_scaffold_19_14
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10108..10470)
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00626.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_8_scaffold_19_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10551..12173
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2K7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52177.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_8_scaffold_19_trna_1
unknown

Not on your lists

comp(12414..12488)
DNA (75bp)
transferRNA
qh_8_scaffold_19_16
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12561..13439
DNA (879bp) protein (293aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W337_9EURY
ubiA; prenyltransferase
qh_8_scaffold_19_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13506..14132
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HNB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86060.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qh_8_scaffold_19_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14380..14787
DNA (408bp) protein (136aa)
CoA-binding domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5C8_HALJB
CoA-binding domain-containing protein
CoA-binding domain-containing protein {ECO:0000313|EMBL:EMA43268.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
qh_8_scaffold_19_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14897..15295)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS29_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA35714.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qh_8_scaffold_19_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15455..15868
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MWP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50147.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_8_scaffold_19_21
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16665..17573)
DNA (909bp) protein (303aa)
Alpha/beta fold family hydrolase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AP76_9EURY
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:ELY99752.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis
rRNA biogenesis protein
qh_8_scaffold_19_22
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17866..18126)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J293_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14850.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_8_scaffold_19_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18203..19582)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQN4_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10493.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhab
qh_8_scaffold_19_24
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19791..20990
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V721_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44613.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_8_scaffold_19_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21077..22225)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1F8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50495.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
qh_8_scaffold_19_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22328..23557
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLL9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45350.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_8_scaffold_19_27
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23745..24368
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WQM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51789.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qh_8_scaffold_19_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24393..24923)
DNA (531bp) protein (177aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY52_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EFW90518.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
ArsR family transcriptional regulator
qh_8_scaffold_19_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24920..25297)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91444.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
Displaying items 1-30 of 58 in total

View Taxonomy