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qh_8_scaffold_920

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_920_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..746)
DNA (744bp) protein (248aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000313|EMBL:EJN59859.1}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Gl
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Halogranum salarium B-1 RepID=J3JG63_9EURY
qh_8_scaffold_920_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(813..1259)
DNA (447bp) protein (149aa)
Permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVE7_9EURY
Permease {ECO:0000313|EMBL:EMA49556.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
permease
qh_8_scaffold_920_3
unknown

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1417..1737
DNA (321bp) protein (107aa)

This feature has no annotations

qh_8_scaffold_920_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1653..1988)
DNA (336bp) protein (112aa)
Permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMW7_9EURY
Permease {ECO:0000313|EMBL:EMA46723.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
permease
qh_8_scaffold_920_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2164..3885)
DNA (1722bp) protein (574aa)
Ammonium transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6R9_9EURY
Ammonium transporter {ECO:0000313|EMBL:EMA41492.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.
Rh family protein/ammonium transporter
qh_8_scaffold_920_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4292..5338)
DNA (1047bp) protein (349aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1};; TaxID=358396 species="Arc
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LQF4_9EURY
qh_8_scaffold_920_7
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5459..6409)
DNA (951bp) protein (317aa)
Glycosyl transferase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A1Z1_9PROT
Glycosyl transferase {ECO:0000313|EMBL:EHI48726.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
glycosyl transferase
qh_8_scaffold_920_8
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6464..7420)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PTC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72085.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
putative membrane-associated, metal-dependent hydrolase
qh_8_scaffold_920_9
unknown

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comp(8238..8600)
DNA (363bp) protein (121aa)

This feature has no annotations

qh_8_scaffold_920_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8659..9831
DNA (1173bp) protein (391aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase {ECO:0000313|EMBL:AEH37020.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AEH37020.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source
Beta-glucosidase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAS8_HALXS
qh_8_scaffold_920_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9849..12053)
DNA (2205bp) protein (735aa)
Fe-S oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDZ8_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54910.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Fe-S oxidoreductase
qh_8_scaffold_920_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12185..12892)
DNA (708bp) protein (236aa)
Cobalt transporter n=3 Tax=Halococcus hamelinensis RepID=M0M6S9_9EURY
Cobalt transporter {ECO:0000313|EMBL:EMA41497.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
bioN; ABC-type transport system permease protein (probable substrate biotin)
qh_8_scaffold_920_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13011..13814)
DNA (804bp) protein (268aa)
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDQ1_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA43876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
abc21a; cobalt ABC transporter ATP-binding protein
qh_8_scaffold_920_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13811..14437)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
BioY protein
qh_8_scaffold_920_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14588..15190
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4B6_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13478.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_8_scaffold_920_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15483..15794
DNA (312bp) protein (104aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
rpoM1; DNA-directed RNA polymerase subunit M1 (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZV7_9EURY
qh_8_scaffold_920_17

Not on your lists

comp(16043..16573)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZSH0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05660.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_8_scaffold_920_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16707..18014
DNA (1308bp) protein (436aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N679_9EURY
glucose-6-phosphate isomerase
qh_8_scaffold_920_19
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18052..18513)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZ77_NATMM
putative nucleic acid-binding protein with PIN domain and Zn ribbon
Uncharacterized protein {ECO:0000313|EMBL:ADD06269.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
qh_8_scaffold_920_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18531..18776)
DNA (246bp) protein (82aa)
PRC-barrel domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S9_9EURY
PRC-barrel domain protein {ECO:0000313|EMBL:ELZ29697.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
PRC-barrel domain protein
qh_8_scaffold_920_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19078..20892
DNA (1815bp) protein (605aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4F1_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor aIF-2
Displaying 21 items

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