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qh_8_scaffold_2103

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_2103_1
unknown

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comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

qh_8_scaffold_2103_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(502..1482)
DNA (981bp) protein (327aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPQ4_HALLT
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACM57342.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
qh_8_scaffold_2103_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2381..2935)
DNA (555bp) protein (185aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227496 species="A
2'-5' RNA ligase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUE3_9EURY
2'-5' RNA ligase
qh_8_scaffold_2103_4
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3129..3941
DNA (813bp) protein (271aa)
DNA topoisomerase type IA zn finger domain-containing protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BGU4_9EURY
DNA topoisomerase type IA zn finger domain-containing protein {ECO:0000313|EMBL:ELZ10111.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" sour
putative nuclease of the RecB family
qh_8_scaffold_2103_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3987..5126
DNA (1140bp) protein (380aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=751944 species="Archaea;
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halobacterium sp. DL1 RepID=G4IBE0_9EURY
qh_8_scaffold_2103_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5170..5742)
DNA (573bp) protein (191aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Halogranum salarium B-1 RepID=J3JHT0_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EJN61246.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranu
methylase involved in ubiquinone/menaquinone biosynthesis
qh_8_scaffold_2103_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5942..6952)
DNA (1011bp) protein (337aa)
Luciferase-like monooxygenase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAH2_9EURY
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:CQR52812.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase
qh_8_scaffold_2103_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7174..7569
DNA (396bp) protein (132aa)
dUTP diphosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WUY2_9EURY
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:ELY53265.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Na
qh_8_scaffold_2103_9
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7657..8235)
DNA (579bp) protein (193aa)
hypothetical protein id=24624155 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative membrane protein {ECO:0000313|EMBL:ERG99663.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50
hypothetical protein
qh_8_scaffold_2103_10
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8259..8624)
DNA (366bp) protein (122aa)
Zinc finger CHY domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BFU9_9EURY
hypothetical protein
Zinc finger CHY domain protein {ECO:0000313|EMBL:ELZ09730.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotol
qh_8_scaffold_2103_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8779..9255
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8W6_9EURY
UPF0212 protein C491_10399 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyti
hypothetical protein
qh_8_scaffold_2103_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9334..9570)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AIR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY98261.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
UPF0058 family protein
qh_8_scaffold_2103_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9719..10123
DNA (405bp) protein (135aa)
Translation initiation factor 2 subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIK3_9EURY
translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=797114 species="Archaea
qh_8_scaffold_2103_14

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comp(10343..10624)
DNA (282bp) protein (94aa)
Uncharacterized protein conserved in archaea n=1 Tax=uncultured archaeon A07HR67 RepID=V4XT34_9ARCH
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ESS03271.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qh_8_scaffold_2103_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10671..11399)
DNA (729bp) protein (243aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR00_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA48026.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hypothetical protein
qh_8_scaffold_2103_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11651..12835)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53637.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying 16 items

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