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qh_8_scaffold_3881

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_3881_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..440)
DNA (438bp) protein (146aa)
Type 11 methyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LM94_HALJP
Type 11 methyltransferase {ECO:0000313|EMBL:EMA33145.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
alkanonic acid methyltransferase
qh_8_scaffold_3881_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(437..1330)
DNA (894bp) protein (298aa)
DNA-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCA2_HALAR
DNA-binding protein {ECO:0000313|EMBL:EMA18846.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
DNA-binding protein
qh_8_scaffold_3881_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1490..2077)
DNA (588bp) protein (196aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=634497 s
Probable deoxycytidine triphosphate deaminase n=2 Tax=Haloarcula RepID=M0JCQ3_HALVA
deoxycytidine triphosphate deaminase
qh_8_scaffold_3881_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2201..2563
DNA (363bp) protein (121aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=662477 species="Archaea; Euryarchaeota; H
Peptidyl-tRNA hydrolase n=4 Tax=Haloarcula RepID=PTH_HALMA
qh_8_scaffold_3881_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2632..3366
DNA (735bp) protein (245aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA3; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEG6_HALVA
qh_8_scaffold_3881_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3366..4058
DNA (693bp) protein (231aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6L7_9EURY
proteasome subunit beta
qh_8_scaffold_3881_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4252..5604
DNA (1353bp) protein (451aa)
Transporter n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEF6_HALVA
Transporter {ECO:0000313|EMBL:EMA06748.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
transporter
qh_8_scaffold_3881_8
unknown

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comp(5643..6293)
DNA (651bp) protein (217aa)

This feature has no annotations

qh_8_scaffold_3881_9
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7350..8081
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HWI7_HALHT
hypothetical protein
Metal-binding protein {ECO:0000313|EMBL:AJF24864.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_8_scaffold_3881_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8083..8724)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JF85_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA06669.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_8_scaffold_3881_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8761..8985)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HWI5_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66548.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_8_scaffold_3881_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9290..9424
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=9 Tax=Haloarcula RepID=RPOP_HALMA
qh_8_scaffold_3881_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9436..9684
DNA (249bp) protein (83aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJR9_HALJP
rpo operon protein
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA32669.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
qh_8_scaffold_3881_14
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9839..10027
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K7D9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF24854.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_8_scaffold_3881_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10065..10817
DNA (753bp) protein (251aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6V9_9EURY
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:EMA17117.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
yafB-3; aldo/keto reductase rbh
qh_8_scaffold_3881_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10905..11741
DNA (837bp) protein (279aa)
Rhodopsin n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1H6_HALMD
rhodopsin
Rhodopsin {ECO:0000313|EMBL:ACV47184.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
Displaying 16 items

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