ggKbase home page

qh_8_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_230_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

639..1001
DNA (363bp) protein (121aa)
fdx; ferredoxin
fdx; ferredoxin id=24657822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ferredoxin {ECO:0000313|EMBL:CBH25030.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8)
qh_8_scaffold_230_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1074..4595
DNA (3522bp) protein (1174aa)
putative Histidine kinase with PAS sensor domain and response regulator receiver domain (EC:2.7.13.3)
Putative Histidine kinase with PAS sensor domain and response regulator receiver domain {ECO:0000313|EMBL:CCQ74906.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCQ74906.1};; TaxID=1288970 species="Bacteria; Prot
two-component sensor histidine kinase id=24657981 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_8_scaffold_230_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4630..4869)
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein id=24657821 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25029.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_trna_1
unknown

Not on your lists

5214..5288
DNA (75bp)
transferRNA
qh_8_scaffold_230_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5393..6265
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1C4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44363.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6429..7262
DNA (834bp) protein (278aa)
hypothetical protein
hypothetical protein id=24657819 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25027.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7571..9253
DNA (1683bp) protein (561aa)
pepN; metallopeptidase
pepN; metallopeptidase id=24657818 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative metallopeptidase {ECO:0000313|EMBL:CBH25026.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_230_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9446..9946
DNA (501bp) protein (167aa)
hypothetical protein id=24657815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25023.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_8
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10115..10351
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DBB
plasmid stability protein
Plasmid stability protein {ECO:0000313|EMBL:AGA91043.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mo
qh_8_scaffold_230_9
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..10680
DNA (333bp) protein (111aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B2EE86
nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AGA91044.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoc
qh_8_scaffold_230_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10953..11621
DNA (669bp) protein (223aa)
Oxidoreductase, zinc-binding dehydrogenase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S303_SALRD
zinc-binding dehydrogenase family oxidoreductase
Oxidoreductase, zinc-binding dehydrogenase family {ECO:0000313|EMBL:ABC44307.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qh_8_scaffold_230_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11697..12122)
DNA (426bp) protein (142aa)
Osmotically inducible protein C n=2 Tax=Salinibacter ruber RepID=Q2S302_SALRD
osmC; osmotically inducible protein C
Osmotically inducible protein C {ECO:0000313|EMBL:ABC45017.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_8_scaffold_230_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12253..13095)
DNA (843bp) protein (281aa)
MscS Mechanosensitive ion channel n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8R4_SALRM
mscS; mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CBH24419.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qh_8_scaffold_230_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13205..14266)
DNA (1062bp) protein (354aa)
Integral membrane protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S300_SALRD
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:ABC43813.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_230_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14623..15105
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24659255 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45190.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15066..15722)
DNA (657bp) protein (219aa)
secreted protein id=24659256 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
secreted protein
Secreted protein {ECO:0000313|EMBL:CBH24422.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qh_8_scaffold_230_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15884..16264
DNA (381bp) protein (127aa)
hypothetical protein
hypothetical protein id=24659257 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24423.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16276..16860)
DNA (585bp) protein (195aa)
Thioredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8R9_SALRM
trxA; thioredoxin
Thioredoxin {ECO:0000313|EMBL:CBH24424.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qh_8_scaffold_230_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16875..17234)
DNA (360bp) protein (120aa)
General stress protein n=2 Tax=Salinibacter ruber RepID=D5H8S0_SALRM
general stress protein
General stress protein {ECO:0000313|EMBL:CBH24425.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_8_scaffold_230_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17423..19252
DNA (1830bp) protein (610aa)
Oligoendopeptidase F n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Z5_SALRD
Oligoendopeptidase F {ECO:0000313|EMBL:ABC44446.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
pepF; oligoendopeptidase F
qh_8_scaffold_230_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19423..20235
DNA (813bp) protein (271aa)
universal stress protein
universal stress protein id=24659263 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Universal stress protein family {ECO:0000313|EMBL:ABC45064.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_8_scaffold_230_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20399..21085
DNA (687bp) protein (229aa)
hypothetical protein
hypothetical protein; K06927 id=24659264 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45773.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21205..23838)
DNA (2634bp) protein (878aa)
ATP-dependent Clp protease, ATPase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8S6_SALRM
clpC; ATP-dependent Clp protease, ATPase subunit
ATP-dependent Clp protease, ATPase subunit {ECO:0000313|EMBL:CBH24431.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_8_scaffold_230_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24154..24522)
DNA (369bp) protein (123aa)
Iron-sulfur cluster assembly accessory protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Y9_SALRD
hesB; iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein, putative {ECO:0000313|EMBL:CBH24432.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
qh_8_scaffold_230_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24611..24850
DNA (240bp) protein (80aa)
Fibronectin, type III n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F2_SALRM
Fibronectin, type III
Fibronectin, type III {ECO:0000313|EMBL:CBH22792.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_8_scaffold_230_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24975..25448)
DNA (474bp) protein (158aa)
hypothetical protein
hypothetical protein id=24657008 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44568.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25494..25922)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H553_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23158.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26050..27774)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H908_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24513.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_230_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27863..29173)
DNA (1311bp) protein (437aa)
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:CBH24514.1}; EC=3.5.1.14 {ECO:0000313|EMBL:CBH24514.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
N-acyl-L-amino acid amidohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H909_SALRM
amaA; N-acyl-L-amino acid amidohydrolase
qh_8_scaffold_230_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29319..31484)
DNA (2166bp) protein (722aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC45699.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659350 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy