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qh_8_scaffold_547

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_547_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..527)
DNA (525bp) protein (175aa)
hypothetical protein
hypothetical protein id=24659135 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24300.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_547_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(647..1150)
DNA (504bp) protein (168aa)
HNH endonuclease n=2 Tax=Salinibacter ruber RepID=D5H8E2_SALRM
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:CBH24297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qh_8_scaffold_547_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1452..2591)
DNA (1140bp) protein (380aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
rluD; ribosomal large subunit pseudouridine synthase D
qh_8_scaffold_547_4
unknown

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comp(2695..2874)
DNA (180bp) protein (60aa)

This feature has no annotations

qh_8_scaffold_547_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2889..4172)
DNA (1284bp) protein (428aa)
Cysteine desulfurase {ECO:0000313|EMBL:CBH24294.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBH24294.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Cysteine desulfurase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D9_SALRM
sufS; cysteine desulfurase
qh_8_scaffold_547_6
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4249..5316)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CG86_METED
Uncharacterized protein {ECO:0000313|EMBL:CEA04103.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
hypothetical protein
qh_8_scaffold_547_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5511..6671)
DNA (1161bp) protein (387aa)
DNA processing protein DprA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3B9_SALRD
dprA; DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:ABC43675.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_8_scaffold_547_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6668..7690)
DNA (1023bp) protein (341aa)
GTPase Obg n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D7_SALRM
GTP-binding protein, GTP1/Obg family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_8_scaffold_547_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7869..8321
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C1_SALRD
rnhA; RNase H
qh_8_scaffold_547_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8548..10101
DNA (1554bp) protein (518aa)
mdtA; multidrug transporter mdtA id=24659127 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_8_scaffold_547_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10141..13272
DNA (3132bp) protein (1044aa)
Acriflavine resistance protein (Cation efflux system) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C4_SALRD
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:ABC45263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acriflavine resistance protein
qh_8_scaffold_547_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13420..14091
DNA (672bp) protein (224aa)
RNA methylase family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D2_SALRM
RNA methylase family protein
RNA methylase family protein {ECO:0000313|EMBL:CBH24287.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_8_scaffold_547_trna_1
unknown

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comp(14327..14399)
DNA (73bp)
transferRNA
qh_8_scaffold_547_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14647..15105
DNA (459bp) protein (153aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CBH24286.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CBH24286.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Deoxyribodipyrimidine photo-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D1_SALRM
phrB; deoxyribodipyrimidine photo-lyase
Displaying 14 items

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