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qh_8_scaffold_4075

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_4075_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..618)
DNA (618bp) protein (206aa)
caiA; acyl-CoA oxidase; K00232 acyl-CoA oxidase [EC:1.3.3.6] id=24659662 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyl-Coenzyme A oxidase {ECO:0000313|EMBL:CBH24828.1}; EC=1.3.3.6 {ECO:0000313|EMBL:CBH24828.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
caiA; acyl-CoA oxidase
qh_8_scaffold_4075_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(780..1844)
DNA (1065bp) protein (355aa)
hemE; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=24659663 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase
qh_8_scaffold_4075_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1968..2282)
DNA (315bp) protein (105aa)
Dienelactone hydrolase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V9_SALRD
clcD; carboxymethylenebutenolidase
Dienelactone hydrolase family {ECO:0000313|EMBL:ABC44249.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_4075_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2257..2772)
DNA (516bp) protein (172aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:CBH24830.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CBH24830.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Carboxymethylenebutenolidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9X5_SALRM
clcD; carboxymethylenebutenolidase
qh_8_scaffold_4075_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3147..3803
DNA (657bp) protein (219aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC45314.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC45314.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V8_SALRD
cdsA; phosphatidate cytidylyltransferase
qh_8_scaffold_4075_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3897..4763
DNA (867bp) protein (289aa)
Putative secreted lipase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V7_SALRD
lipase
Putative secreted lipase {ECO:0000313|EMBL:ABC44319.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_8_scaffold_4075_7
unknown

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comp(4823..5953)
DNA (1131bp) protein (377aa)

This feature has no annotations

qh_8_scaffold_4075_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6389..6913
DNA (525bp) protein (175aa)
Putative ECF-subfamily sigma factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V5_SALRD
ECF-subfamily sigma factor
Putative ECF-subfamily sigma factor {ECO:0000313|EMBL:ABC45414.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_8_scaffold_4075_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7038..8462
DNA (1425bp) protein (475aa)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HA
Tryptophanase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y1_SALRM
tnaA; tryptophanase
qh_8_scaffold_4075_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(8547..9335)
DNA (789bp) protein (263aa)
indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEZ7_9SPIO
qh_8_scaffold_4075_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9725..10237)
DNA (513bp) protein (171aa)
L-asparaginase {ECO:0000313|EMBL:ABC44946.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABC44946.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
Asparaginase n=2 Tax=Salinibacter ruber RepID=D5H9Y2_SALRM
ansA; asparaginase
qh_8_scaffold_4075_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10833..11042)
DNA (210bp) protein (70aa)
hpt; hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=24659671 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBH24838.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBH24838.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
hpt; Hypoxanthine phosphoribosyltransferase
qh_8_scaffold_4075_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11445..12521)
DNA (1077bp) protein (359aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
mesJ; cell cycle protein MesJ
Displaying 13 items

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