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qh_8_scaffold_106

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_106_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..136)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65246.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
qh_8_scaffold_106_2
unknown

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comp(286..789)
DNA (504bp) protein (168aa)

This feature has no annotations

qh_8_scaffold_106_3

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1784..2281
DNA (498bp) protein (166aa)
Integrase (Fragment) n=1 Tax=uncultured bacterium RepID=H6V4T8_9BACT
Integrase {ECO:0000313|EMBL:AFA35776.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transposase
qh_8_scaffold_106_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2423..3622)
DNA (1200bp) protein (400aa)
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=24656813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=761659 species="Bacter
dnaN; DNA polymerase III subunit beta
qh_8_scaffold_106_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3853..5514)
DNA (1662bp) protein (554aa)
chromosomal replication initiation protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B2F6
dnaA; chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qh_8_scaffold_106_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6422..6967
DNA (546bp) protein (182aa)
hypothetical protein
hypothetical protein; K07040 uncharacterized protein id=24656847 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22958.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_106_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7029..7226
DNA (198bp) protein (66aa)
50S ribosomal protein L32 n=2 Tax=Salinibacter ruber RepID=RL32_SALRD
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_106_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7373..8398
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDV8_RHOMR
phosphate acyltransferase rbh
qh_8_scaffold_106_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8613..9719
DNA (1107bp) protein (369aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase n=1 Tax=Salisaeta longa RepID=UPI0003B475DB
qh_8_scaffold_106_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9921..10865
DNA (945bp) protein (315aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
ACP S-malonyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B59810
malonyl CoA-acyl carrier protein transacylase
qh_8_scaffold_106_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10959..11735
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22963.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_106_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11878..12627
DNA (750bp) protein (250aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH80_RHOM4
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACY49669.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qh_8_scaffold_106_13
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12699..14033
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000367053D
Restriction endonuclease NotI {ECO:0000313|EMBL:CRG51166.1}; TaxID=633 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseud
hypothetical protein
qh_8_scaffold_106_14
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(14048..14908)
DNA (861bp) protein (287aa)
dam; D12 class N6 adenine-specific DNA methyltransferase (EC:2.1.1.72) Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
dam; D12 class N6 adenine-specific DNA methyltransferase (EC:2.1.1.72)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG79_9CYAN
qh_8_scaffold_106_15
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15508..16749)
DNA (1242bp) protein (414aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Bifunctional peptide methionine sulfoxide reductase MsrA/peptide methionine sulfoxide reductase MsrB n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VXI2_9ALTE
Bifunctional peptide methionine sulfoxide reductase MsrA/peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:ENO14975.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria;
qh_8_scaffold_106_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17033..18529
DNA (1497bp) protein (499aa)
ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=24656854 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:ABC46146.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_8_scaffold_106_17
Enterococcus caccae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(18620..19594)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Enterococcus caccae ATCC BAA-1240 RepID=R3U4Z7_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOL49019.1}; TaxID=1158612 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus caccae ATCC BAA-1240
autolysin
qh_8_scaffold_106_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19749..20852)
DNA (1104bp) protein (368aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
thioredoxin reductase n=1 Tax=Salisaeta longa RepID=UPI0003B71F8D
trxB; thioredoxin-disulfide reductase
qh_8_scaffold_106_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20918..21262)
DNA (345bp) protein (115aa)
trxA; Thioredoxin
trx; thioredoxin; K03671 thioredoxin 1 id=24658605 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBH25795.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_8_scaffold_106_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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21738..22592
DNA (855bp) protein (285aa)
Phenazine biosynthesis protein PhzF family id=4921077 bin=GWC2_Nitrospirae-rel_56_14 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PhzF family phenazine biosynthesis protein
qh_8_scaffold_106_21
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(22782..23099)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Putative uncharacterized protein id=4954840 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
qh_8_scaffold_106_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23083..23382)
DNA (300bp) protein (100aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H877_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24232.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_8_scaffold_106_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23478..25847)
DNA (2370bp) protein (790aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
qh_8_scaffold_106_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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25997..26413
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030971BC
id=2907919 Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
Displaying 24 items

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