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qh_8_scaffold_408

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_408_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
cupin superfamily protein
cupin superfamily protein id=24657644 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cupin superfamily protein {ECO:0000313|EMBL:ABC44118.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_408_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(458..646)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H766_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43817.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_408_3
unknown

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comp(740..961)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_8_scaffold_408_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1273..4512
DNA (3240bp) protein (1080aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B68CB2
excinuclease ABC subunit A rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
qh_8_scaffold_408_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4571..6559)
DNA (1989bp) protein (663aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ABC43925.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC43925.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
helicase n=1 Tax=Salisaeta longa RepID=UPI0003B503D4
ATP-dependent DNA helicase RecQ
qh_8_scaffold_408_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7022..8032
DNA (1011bp) protein (337aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qh_8_scaffold_408_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8066..9136)
DNA (1071bp) protein (357aa)
Integral membrane protein DUF6 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y7_SALRD
hypothetical protein
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qh_8_scaffold_408_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9232..9660)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24659635 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_408_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9833..10843)
DNA (1011bp) protein (337aa)
(NAD+) isocitrate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] id=24659636 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
(NAD+) isocitrate dehydrogenase
Putative (NAD+) isocitrate dehydrogenase {ECO:0000313|EMBL:ABC44228.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_8_scaffold_408_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11011..11481)
DNA (471bp) protein (157aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B44A76
Biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AEN72996.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_8_scaffold_408_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11611..12204)
DNA (594bp) protein (198aa)
Biopolymer transport protein ExbD/TolR n=2 Tax=Rhodothermus marinus RepID=D0MJE6_RHOM4
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACY48604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_8_scaffold_408_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12327..12599)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B79082
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24805.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_408_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12699..13634)
DNA (936bp) protein (312aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Rhodothermus marinus RepID=D0MJE7_RHOM4
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEN72993.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qh_8_scaffold_408_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14115..15884)
DNA (1770bp) protein (590aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACY48606.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACY48606.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJE8_RHOM4
carboxyl-terminal protease
qh_8_scaffold_408_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16339..17319
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B63AC0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25012.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_408_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17358..18428
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B369BC
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24188.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_8_scaffold_408_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18516..18896)
DNA (381bp) protein (127aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=762570 specie
Holliday junction resolvase n=1 Tax=Salisaeta longa RepID=UPI0003B70F6C
Holliday junction resolvase YqgF
qh_8_scaffold_408_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19257..19751)
DNA (495bp) protein (165aa)
Histone family protein DNA-binding protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY4_RHOM4
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACY47769.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qh_8_scaffold_408_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19966..20589)
DNA (624bp) protein (208aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACY47768.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACY47768.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
MFS transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5D90F
(p)ppGpp synthetase I SpoT/RelA
qh_8_scaffold_408_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20610..22175)
DNA (1566bp) protein (522aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H829_SALRM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
qh_8_scaffold_408_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22416..23258)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D222F
NHL repeat-containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ABJ87487.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
Displaying 21 items

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