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qh_8_scaffold_78

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_78_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

157..945
DNA (789bp) protein (263aa)
enoyl-CoA hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B35379
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACY49083.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qh_8_scaffold_78_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1300..3405
DNA (2106bp) protein (702aa)
ABC transporter, ATP-binding protein, MDR family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0L1_SALRD
ABC transporter ATP-binding protein/permease
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qh_8_scaffold_78_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3502..4458
DNA (957bp) protein (319aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4
ribonuclease Z
qh_8_scaffold_78_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4479..5366)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71750
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22951.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_78_5
unknown

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comp(5548..5847)
DNA (300bp) protein (100aa)

This feature has no annotations

qh_8_scaffold_78_trna_1
unknown

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comp(5902..5989)
DNA (88bp)
transferRNA
qh_8_scaffold_78_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6119..6688)
DNA (570bp) protein (190aa)
frr; ribosome recycling factor
frr; ribosome recycling factor; K02838 ribosome recycling factor id=24656841 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=761659 species="Bacteria;
qh_8_scaffold_78_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6989..7801)
DNA (813bp) protein (271aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=24656842 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
pyrH; uridylate kinase
qh_8_scaffold_78_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8045..8902)
DNA (858bp) protein (286aa)
tsf; translation elongation factor Ts
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=24656843 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qh_8_scaffold_78_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(9033..10190)
DNA (1158bp) protein (386aa)
30S ribosomal protein S2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K0_SALRM
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_8_scaffold_78_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(10362..10751)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=2 Tax=Salinibacter ruber RepID=D5H4K1_SALRM
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_8_scaffold_78_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(10869..11318)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_8_scaffold_78_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11578..12285
DNA (708bp) protein (236aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_8_scaffold_78_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12370..13512
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B2FF6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY46912.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_8_scaffold_78_14
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13652..15037)
DNA (1386bp) protein (462aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3C6_DEIPD
Zn-dependent hydrolase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ67944.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus per
qh_8_scaffold_78_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15101..15481
DNA (381bp) protein (127aa)
AAA ATPase central domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS7_RHOMR
AAA ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:ACY48982.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qh_8_scaffold_78_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15596..15793)
DNA (198bp) protein (66aa)
Prevent-host-death family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS6_RHOMR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEN72704.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qh_8_scaffold_78_17
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16250..17713
DNA (1464bp) protein (488aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE4_SYNAS
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
hypothetical protein
qh_8_scaffold_78_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17716..18483)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7G0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23965.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_78_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18496..19362)
DNA (867bp) protein (289aa)
von Willebrand factor type A n=1 Tax=Salisaeta longa RepID=UPI0003B6C7E1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49130.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_8_scaffold_78_20
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19415..19900)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YXY6_AEQSU
Signal peptide protein {ECO:0000313|EMBL:KJJ39466.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivo
hypothetical protein
qh_8_scaffold_78_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20091..21293)
DNA (1203bp) protein (401aa)
DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:CBH23962.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH23962.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
DNA polymerase III gamma/tau subunit n=2 Tax=Salinibacter ruber RepID=D5H7F7_SALRM
DNA polymerase III subunit delta'
qh_8_scaffold_78_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21389..23899)
DNA (2511bp) protein (837aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
penicillin-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B782C7
qh_8_scaffold_78_23
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..25093
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B37F59
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABI57420.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimni
qh_8_scaffold_78_24
unknown

Not on your lists

comp(25602..25808)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_8_scaffold_78_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26278..27324
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40521
dioxygenase
Dioxygenase {ECO:0000313|EMBL:CBH23440.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qh_8_scaffold_78_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27487..28599
DNA (1113bp) protein (371aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4R1_SALRD
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
qh_8_scaffold_78_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28766..29914)
DNA (1149bp) protein (383aa)
Naringenin-chalcone synthase {ECO:0000313|EMBL:CBH24512.1}; EC=2.3.1.74 {ECO:0000313|EMBL:CBH24512.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
chalcone synthase
chalcone synthase id=24659344 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_8_scaffold_78_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30149..31012)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5394D
MazG family protein
MazG family protein {ECO:0000313|EMBL:ABC45775.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_8_scaffold_78_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31348..31701
DNA (354bp) protein (118aa)
Single-stranded DNA-binding protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG88_RHOM4
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacte
Displaying 30 items

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