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qh_8_scaffold_6085

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_6085_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..160
DNA (159bp) protein (53aa)
Integron integrase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0B1_NITHN
integron integrase
Integron integrase {ECO:0000313|EMBL:ADE14437.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (s
qh_8_scaffold_6085_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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293..1357
DNA (1065bp) protein (355aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=24658906 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
argS; arginyl-tRNA synthetase
qh_8_scaffold_6085_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1357..1929
DNA (573bp) protein (191aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=24658906 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
Suspect SCG annotation. See neighboring gene [qh_8_scaffold_6085_2].
argS; arginyl-tRNA synthetase
qh_8_scaffold_6085_4
unknown

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comp(2159..2314)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_8_scaffold_6085_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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2352..2624
DNA (273bp) protein (91aa)
DNA mismatch repair protein MutS n=1 Tax=Salisaeta longa RepID=UPI0003B2EF46
Smr protein/MutS2 Tax=GWC2_Nitrospirae_57_13_curated
Smr protein/MutS2-like protein
qh_8_scaffold_6085_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2993..4696
DNA (1704bp) protein (568aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7V4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24109.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_6085_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4783..5043)
DNA (261bp) protein (87aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Salinibacter ruber RepID=D5H7V3_SALRM
TRAP transporter DctM family protein
TRAP transporter, DctM subunit subfamily {ECO:0000313|EMBL:ABC45862.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
Displaying 7 items

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