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qh_8_scaffold_1245

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1245_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..64)
DNA (63bp) protein (21aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Suspect SCG annotation. See neighboring gene [qh_8_scaffold_1245_2].
qh_8_scaffold_1245_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(101..496)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP64_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
archaeal ribosomal protein S9P
qh_8_scaffold_1245_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(490..924)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rpl13p; 50S ribosomal protein L13P
qh_8_scaffold_1245_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(921..1220)
DNA (300bp) protein (100aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
ribosomal protein L18E
qh_8_scaffold_1245_trna_2
unknown

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comp(1220..1304)
DNA (85bp)
transferRNA
qh_8_scaffold_1245_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1491..2237)
DNA (747bp) protein (249aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
qh_8_scaffold_1245_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2425..2952)
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
qh_8_scaffold_1245_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2953..3468)
DNA (516bp) protein (172aa)
30S ribosomal protein S13 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSK5_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
30S ribosomal protein S18e (S13p)
qh_8_scaffold_1245_trna_1
unknown

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comp(3486..3570)
DNA (85bp)
transferRNA
qh_8_scaffold_1245_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4293..4628
DNA (336bp) protein (112aa)
ATP-binding protein Mrp 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V3_9EURY
ATP-binding protein Mrp 1 {ECO:0000313|EMBL:EMA52558.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
mrp_1; ATP-binding protein Mrp 1
qh_8_scaffold_1245_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4697..5218)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50193.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_8_scaffold_1245_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5399..6829
DNA (1431bp) protein (477aa)
Aldehyde Dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N645_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA52584.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
aldehyde dehydrogenase
qh_8_scaffold_1245_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6837..9524
DNA (2688bp) protein (896aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E7_9EURY
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:EMA52585.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
qh_8_scaffold_1245_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9610..10872)
DNA (1263bp) protein (421aa)
N-acylglucosamine 2-epimerase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9S0_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA42083.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
N-acylglucosamine 2-epimerase
qh_8_scaffold_1245_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11027..11887
DNA (861bp) protein (287aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSG3_9EURY
Displaying 15 items

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