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qh_8_scaffold_2568

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_2568_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

qh_8_scaffold_2568_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(270..1406)
DNA (1137bp) protein (379aa)
XerC/D-like integrase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0ACP0_9EURY
XerC/D-like integrase {ECO:0000313|EMBL:ELY95118.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;
XerC/D-like integrase
qh_8_scaffold_2568_trna_1
unknown

Not on your lists

comp(1592..1662)
DNA (71bp)
transferRNA
qh_8_scaffold_2568_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1831..2697
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44116.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_8_scaffold_2568_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2712..3725
DNA (1014bp) protein (338aa)
50S ribosomal protein L3 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEC6_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
LSU ribosomal protein L3P
qh_8_scaffold_2568_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3726..4466
DNA (741bp) protein (247aa)
50S ribosomal protein L4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI0_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
rpl4lp; 50S ribosomal protein L4P
qh_8_scaffold_2568_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4463..4714
DNA (252bp) protein (84aa)
50S ribosomal protein L23P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHF0_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
50S ribosomal protein L23
qh_8_scaffold_2568_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4717..4938
DNA (222bp) protein (74aa)
50S ribosomal protein L2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU48_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
50S ribosomal protein L8e (L2p)
qh_8_scaffold_2568_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4935..5276
DNA (342bp) protein (114aa)
50S ribosomal protein L2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI62_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
50S ribosomal protein L2
qh_8_scaffold_2568_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5278..5700
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEG4_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ribosomal protein S19/S15
qh_8_scaffold_2568_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5724..6218
DNA (495bp) protein (165aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
qh_8_scaffold_2568_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6218..7345
DNA (1128bp) protein (376aa)
30S ribosomal protein S3 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY3_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
30S ribosomal protein S3e (S3p)
qh_8_scaffold_2568_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7345..7569
DNA (225bp) protein (75aa)
50S ribosomal protein L29P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTS6_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L29
qh_8_scaffold_2568_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7538..7822
DNA (285bp) protein (95aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU44_9EURY
qh_8_scaffold_2568_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8161..8559
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED4_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
rpl14p; 50S ribosomal protein L14P
qh_8_scaffold_2568_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8571..8927
DNA (357bp) protein (119aa)
50S ribosomal protein L24P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUX7_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L24
qh_8_scaffold_2568_16
Halorubrum_J07HR59, Halorubrum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9034..9420)
DNA (387bp) protein (129aa)
id=24636011 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
id=24636011 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
qh_8_scaffold_2568_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9626..10144
DNA (519bp) protein (173aa)
50S ribosomal protein L5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI71_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
50S ribosomal protein L5
qh_8_scaffold_2568_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10141..10314
DNA (174bp) protein (58aa)
30S ribosomal protein S14 type Z n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH5_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
rps14P; 30S ribosomal protein S14P
qh_8_scaffold_2568_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10311..10703
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE1_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
rps8p; 30S ribosomal protein S8P
qh_8_scaffold_2568_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10706..11254
DNA (549bp) protein (183aa)
50S ribosomal protein L6P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUF8_9EURY
50S ribosomal protein L6P {ECO:0000313|EMBL:EMA49372.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
ribosomal protein L6P
qh_8_scaffold_2568_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11247..12245
DNA (999bp) protein (333aa)
50S ribosomal protein L32e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUR2_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA49371.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
50S ribosomal protein L32e
qh_8_scaffold_2568_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12238..12699
DNA (462bp) protein (154aa)
50S ribosomal protein L19e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI75_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl19A; 50S ribosomal protein L19e
qh_8_scaffold_2568_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12702..13283
DNA (582bp) protein (194aa)
50S ribosomal protein L18P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX09_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L18
qh_8_scaffold_2568_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13276..13911
DNA (636bp) protein (212aa)
30S ribosomal protein S5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVL0_9EURY
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
rpsE; 30S ribosomal protein S5P
qh_8_scaffold_2568_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13911..14375
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFJ6_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl30p; 50S ribosomal protein L30P
Displaying 26 items

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