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qh_9_scaffold_543

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_543_1
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(458..1579)
DNA (1122bp) protein (374aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F3_HALTV
Gluconate dehydratase {ECO:0000313|EMBL:KDE60555.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
D-gluconate dehydratase
qh_9_scaffold_543_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1789..2544
DNA (756bp) protein (252aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN1_9EURY
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ELZ27970.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum p
qh_9_scaffold_543_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2779..4269)
DNA (1491bp) protein (497aa)
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PD45_9EURY
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:ERG91497.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloqu
methylmalonate-semialdehyde dehydrogenase
qh_9_scaffold_543_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4398..5183
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP3_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27980.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
short-chain dehydrogenase/reductase SDR
qh_9_scaffold_543_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5153..5494)
DNA (342bp) protein (114aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZT6_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ28133.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
major facilitator superfamily MFS_1
qh_9_scaffold_543_6
unknown

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5886..6248
DNA (363bp) protein (121aa)

This feature has no annotations

qh_9_scaffold_543_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6563..7327)
DNA (765bp) protein (255aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP7_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ27985.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
IclR family transcriptional regulator
qh_9_scaffold_543_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7736..7942
DNA (207bp) protein (69aa)
SMC-like protein Sph2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS93_NATM8
sph2; SMC-like protein Sph2
SMC-like protein Sph2 {ECO:0000313|EMBL:CCQ37167.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qh_9_scaffold_543_9
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8002..8247)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000361AAA8
Uncharacterized protein {ECO:0000313|EMBL:KIZ16592.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.
mmyY; hypothetical protein
qh_9_scaffold_543_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8716..9531
DNA (816bp) protein (272aa)
Transcription initiation factor IIB n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W004_9EURY
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383, ECO:0000313|EMBL:EJN57151.1}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1210908 species="Archaea; Euryarchaeota; Halob
qh_9_scaffold_543_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9786..10244)
DNA (459bp) protein (153aa)
Efflux protein, mate family n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XKD3_9EURY
Efflux protein, mate family {ECO:0000313|EMBL:ELY61886.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innerm
multidrug transporter MatE
qh_9_scaffold_543_12
unknown

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comp(10241..10765)
DNA (525bp) protein (175aa)

This feature has no annotations

qh_9_scaffold_543_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10875..11195)
DNA (321bp) protein (107aa)
Efflux protein, mate family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNJ5_HALBP
efflux protein, mate family
Efflux protein, mate family {ECO:0000313|EMBL:ELY27661.1}; Putative efflux protein, MATE family {ECO:0000313|EMBL:ADQ66349.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
qh_9_scaffold_543_14
unknown

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comp(11703..11819)
DNA (117bp) protein (39aa)

This feature has no annotations

qh_9_scaffold_543_15
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12707..12880
DNA (174bp) protein (58aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
qh_9_scaffold_543_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12848..13903)
DNA (1056bp) protein (352aa)
Putative transposase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQP2_HALVA
Putative transposase {ECO:0000313|EMBL:EMA09965.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29
transposase
Displaying 16 items

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