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qh_9_scaffold_1978

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_1978_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..352
DNA (351bp) protein (117aa)
Hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCU9_9EURY
Hydroxypyruvate isomerase {ECO:0000313|EMBL:ELZ32633.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
qh_9_scaffold_1978_2
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(728..1075)
DNA (348bp) protein (116aa)
Ferredoxin n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9R1_HALMT
fdx; ferredoxin
Ferredoxin {ECO:0000313|EMBL:AFK20971.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 33500 / DS
qh_9_scaffold_1978_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1076..2476)
DNA (1401bp) protein (467aa)
Selenium-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JS54_HALVA
selenium-binding protein
Selenium-binding protein {ECO:0000313|EMBL:EMA10814.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATC
qh_9_scaffold_1978_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2626..3675
DNA (1050bp) protein (350aa)
Threonine synthase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FBI8_9EURY
Threonine synthase {ECO:0000313|EMBL:ELZ56708.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;
pyridoxal-5'-phosphate-dependent protein subunit beta
qh_9_scaffold_1978_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3906..4505)
DNA (600bp) protein (200aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW9_NATPD
tatC2; twin arginine translocation system subunit TatC
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CAI48766.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
qh_9_scaffold_1978_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4743..5825
DNA (1083bp) protein (361aa)
Ribonuclease BN n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLD2_9EURY
Ribonuclease BN {ECO:0000313|EMBL:ELZ22694.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
hypothetical protein
qh_9_scaffold_1978_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5900..6034)
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVX9_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
30S ribosomal protein S27a
qh_9_scaffold_1978_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6035..6337)
DNA (303bp) protein (101aa)
30S ribosomal protein S24e n=9 Tax=Haloarcula RepID=RS24_HALMA
rps24e; 30S ribosomal protein S24
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
qh_9_scaffold_1978_9
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6741..7127
DNA (387bp) protein (129aa)
Tax=BJP_IG2069_Anaerolineales_43_63
qh_9_scaffold_1978_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7443..7826)
DNA (384bp) protein (128aa)
Transposase IS1341 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNV6_9EURY
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AKH97483.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
IS1341-type transposase
qh_9_scaffold_1978_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8231..8488
DNA (258bp) protein (86aa)
A-type ATP synthase subunit K n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBA0_9EURY
A-type ATP synthase subunit K {ECO:0000313|EMBL:EMA55247.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
A-type ATP synthase subunit K
qh_9_scaffold_1978_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8504..9082
DNA (579bp) protein (193aa)
V-type proton ATPase subunit E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D061_9EURY
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
H+transporting two-sector ATPase E subunit
qh_9_scaffold_1978_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9079..10137
DNA (1059bp) protein (353aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2H5_9EURY
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_9_scaffold_1978_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10134..10457
DNA (324bp) protein (108aa)
V-type ATP synthase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D212_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Vacuolar H+transporting two-sector ATPase F subunit
qh_9_scaffold_1978_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10459..11373
DNA (915bp) protein (305aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=797114 species="Archaea;
ntpA; V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D416_9EURY
qh_9_scaffold_1978_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11313..12143
DNA (831bp) protein (277aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=797114 species="Archaea;
atpA; V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D416_9EURY
qh_9_scaffold_1978_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12146..13555
DNA (1410bp) protein (470aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0B0_9EURY
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qh_9_scaffold_1978_18

Not on your lists

14072..14449
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XU91_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05763.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_9_scaffold_1978_19

Not on your lists

comp(14472..15326)
DNA (855bp) protein (285aa)
5'-Nucleotidase domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MM37_9ARCH
5'-nucleotidase
5'-Nucleotidase domain-containing protein {ECO:0000313|EMBL:AEN05864.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_9_scaffold_1978_20
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

15411..16160
DNA (750bp) protein (250aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0Y525_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB09872.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
LigA
qh_9_scaffold_1978_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16422..18446
DNA (2025bp) protein (675aa)
Bacterio-opsin activator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D066_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ28901.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator)
qh_9_scaffold_1978_22
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18644..18943
DNA (300bp) protein (100aa)
Bacteriorhodopsin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2I2_9EURY
Rhodopsin {ECO:0000313|EMBL:KDS91827.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
rhodopsin
Displaying 22 items

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