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qh_9_scaffold_4659

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_4659_1
unknown

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218..388
DNA (171bp) protein (57aa)

This feature has no annotations

qh_9_scaffold_4659_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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455..916
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23460.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_9_scaffold_4659_3

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comp(1310..2239)
DNA (930bp) protein (310aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZMI3_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03665.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC transporter
qh_9_scaffold_4659_4
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2489..3403)
DNA (915bp) protein (305aa)
binding-protein-dependent transport system inner membrane protein id=24653139 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13642.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
qh_9_scaffold_4659_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3400..4335)
DNA (936bp) protein (312aa)
binding-protein-dependent transport system inner membrane protein id=24653140 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13643.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
qh_9_scaffold_4659_6

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comp(4373..5125)
DNA (753bp) protein (251aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XNP0_9ARCH
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS03663.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
twin-arginine translocation pathway signal protein
qh_9_scaffold_4659_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5826..6209)
DNA (384bp) protein (128aa)
Signal recognition particle receptor FtsY n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQJ6_HALAR
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobac
dpa; signal recognition particle receptor
qh_9_scaffold_4659_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6863..7321)
DNA (459bp) protein (153aa)
Prefoldin subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4L7_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
prefoldin subunit alpha
qh_9_scaffold_4659_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7318..7536)
DNA (219bp) protein (73aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
qh_9_scaffold_4659_10

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7628..8719
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTW7_9EURY
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS07320.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
malate/L-lactate dehydrogenase
qh_9_scaffold_4659_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8711..9283)
DNA (573bp) protein (191aa)
Translation initiation factor 6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D656_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor IF-6
qh_9_scaffold_4659_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9286..9564)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F6_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L31E
qh_9_scaffold_4659_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9791..10288
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UY31_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15288.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_9_scaffold_4659_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10414..11040)
DNA (627bp) protein (209aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4C8_9EURY
pseudouridylate synthase
Displaying 14 items

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