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qh_9_scaffold_1102

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_1102_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..666)
DNA (666bp) protein (222aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1085028 species="Archaea; Euryarcha
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=24646064 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
lysyl-tRNA synthetase
qh_9_scaffold_1102_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(901..1587)
DNA (687bp) protein (229aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2U3_HALMD
pyrH; uridylate kinase
qh_9_scaffold_1102_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1970..2212
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D335_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33810.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qh_9_scaffold_1102_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2390..3538
DNA (1149bp) protein (383aa)
Peptidase M50 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2U5_HALMD
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACV47417.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain AT
qh_9_scaffold_1102_5
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3535..4464)
DNA (930bp) protein (310aa)
Thiamine-monophosphate kinase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KA44_9EURY
thiL; thiamine monophosphate kinase
Thiamine monophosphate kinase {ECO:0000313|EMBL:AAV47883.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui
qh_9_scaffold_1102_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4680..5954
DNA (1275bp) protein (425aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Natronococcus occultus SP4 RepID=L0K1K3_9EURY
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA27214.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisa
qh_9_scaffold_1102_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6070..7203
DNA (1134bp) protein (378aa)
ABC transporter n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IK39_9EURY
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:CQR52070.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="
ABC transporter
qh_9_scaffold_1102_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7314..8588
DNA (1275bp) protein (425aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=24614774 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
qh_9_scaffold_1102_9
unknown

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comp(8632..8784)
DNA (153bp) protein (51aa)

This feature has no annotations

qh_9_scaffold_1102_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8881..10152
DNA (1272bp) protein (424aa)
Extracellular ligand-binding receptor n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HEQ6_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ELZ82232.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii
ABC-type branched-chain amino acid transport system, periplasmic component
qh_9_scaffold_1102_11
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10305..10955
DNA (651bp) protein (217aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9U8_HALRX
branched-chain amino acid ABC-type transport system, permease component
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AGB15016.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloviva
Displaying 11 items

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