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qh_9_scaffold_3420

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_3420_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1072)
DNA (1071bp) protein (357aa)
metallo-beta-lactamase family protein, RNA-specific id=24647579 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative metal-dependent Rnase {ECO:0000313|EMBL:ERH08716.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
epf2; mRNA 3'-end processing factor-like protein
qh_9_scaffold_3420_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1355..1840
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CAV5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20426.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_9_scaffold_3420_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1866..2060)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7BLW3_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY80955.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qh_9_scaffold_3420_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2319..3437
DNA (1119bp) protein (373aa)
Lycopene cyclase domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCB4_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:EMA67802.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense J
lycopene cyclase domain protein
qh_9_scaffold_3420_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3476..3838
DNA (363bp) protein (121aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:AEM56802.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AEM56802.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
Cytidine deaminase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FLB7_9EURY
qh_9_scaffold_3420_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3838..4665
DNA (828bp) protein (276aa)
purine or other phosphorylase family 1; K00757 uridine phosphorylase [EC:2.4.2.3] id=24649495 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uridine phosphorylase {ECO:0000313|EMBL:ERH10585.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
uridine phosphorylase
qh_9_scaffold_3420_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4796..5962)
DNA (1167bp) protein (389aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P050_HALMD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACV48842.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
qh_9_scaffold_3420_8
unknown

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6738..7880
DNA (1143bp) protein (381aa)

This feature has no annotations

qh_9_scaffold_3420_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7935..8849
DNA (915bp) protein (305aa)
arg1; arginase (EC:3.5.3.1)
Arginase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KUF7_9EURY
Arginase {ECO:0000313|EMBL:EMA24947.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;"
qh_9_scaffold_3420_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8973..9344)
DNA (372bp) protein (124aa)
IS200-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRE6_NATM8
IS200-type transposase
IS200-type transposase ISNamo17 {ECO:0000313|EMBL:CCQ36821.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
Displaying 10 items

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