ggKbase home page

qh_9_scaffold_331

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_331_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..298
DNA (297bp) protein (99aa)
Hypotheical protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A9D4_9EURY
Hypotheical protein {ECO:0000313|EMBL:GAD51353.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
qh_9_scaffold_331_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(291..2981)
DNA (2691bp) protein (897aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP44_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
rad50; DNA double-strand break repair ATPase Rad50
qh_9_scaffold_331_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2978..3295)
DNA (318bp) protein (106aa)
metallophosphatase n=1 Tax=Halomicrobium katesii RepID=UPI0003659CD6
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACV49004.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qh_9_scaffold_331_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4179..4715
DNA (537bp) protein (179aa)
Nudix family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1V4_9EURY
Nudix family protein {ECO:0000313|EMBL:EMA51856.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1
mutT5; Mut/nudix family protein
qh_9_scaffold_331_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4747..5964
DNA (1218bp) protein (406aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRY5_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI49106.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_9_scaffold_331_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6046..6966)
DNA (921bp) protein (307aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=2 Tax=Haloarcula hispanica RepID=G0HVF8_HALHT
biotin--acetyl-CoA-carboxylase ligase
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:AJF26343.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
qh_9_scaffold_331_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7001..7249)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:CCQ37179.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_9_scaffold_331_8
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7222..7398)
DNA (177bp) protein (59aa)
50S ribosomal protein L37e n=2 Tax=Natronorubrum RepID=L9WFZ6_9EURY
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;"
ribosomal protein L37E
qh_9_scaffold_331_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7395..7577)
DNA (183bp) protein (61aa)
SnRNP-like protein n=5 Tax=Haloarcula RepID=Q5V3W7_HALMA
snRNP
SnRNP-like protein {ECO:0000313|EMBL:EMA12036.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799
qh_9_scaffold_331_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7729..9450
DNA (1722bp) protein (574aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI48844.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48844.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP2_NATPD
signal-transducing histidine kinase
qh_9_scaffold_331_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9451..10512)
DNA (1062bp) protein (354aa)
celM; cellulase; endo-1,3(4)-beta-glucanase (EC:3.2.1.6 3.2.1.4)
Peptidase M42 family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRC6_9EURY
Peptidase M42 family protein {ECO:0000313|EMBL:ELZ24942.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
qh_9_scaffold_331_12
unknown

Not on your lists

10589..10783
DNA (195bp) protein (65aa)

This feature has no annotations

qh_9_scaffold_331_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10780..11397)
DNA (618bp) protein (206aa)
Phospholipase/carboxylesterase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRM1_NATP1
putative esterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ELY71157.1}; Putative esterase {ECO:0000313|EMBL:AGB33468.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qh_9_scaffold_331_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11549..11896
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Halobacterium sp. DL1 RepID=G4IBX1_9EURY
HxlR family transcriptional regulator {ECO:0000313|EMBL:AHG04133.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
hypothetical protein
qh_9_scaffold_331_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11882..12643)
DNA (762bp) protein (254aa)
Type 11 methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJK1_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ22522.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
methyltransferase type 11
qh_9_scaffold_331_16
unknown

Not on your lists

12703..12897
DNA (195bp) protein (65aa)

This feature has no annotations

qh_9_scaffold_331_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12947..13900
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48215.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_9_scaffold_331_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13915..16035)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPL0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46400.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
thioredoxin domain protein
qh_9_scaffold_331_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16154..17455
DNA (1302bp) protein (434aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP26_9EURY
qh_9_scaffold_331_20
unknown

Not on your lists

17526..17684
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 20 items

View Taxonomy