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qh_9_scaffold_3387

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_3387_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..256
DNA (255bp) protein (85aa)
Ferredoxin n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXC9_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA50256.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
ferredoxin
qh_9_scaffold_3387_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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327..1175
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05084.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_9_scaffold_3387_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1209..2024)
DNA (816bp) protein (272aa)
Probable amidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INC9_NATPD
amidase
Probable amidase {ECO:0000313|EMBL:CAI50374.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
qh_9_scaffold_3387_4
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2075..3586
DNA (1512bp) protein (504aa)
Gm9573, Muc21; predicted gene 9573
Uncharacterized protein {ECO:0000313|EMBL:ETZ97770.1}; TaxID=1299328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 824.;"
qh_9_scaffold_3387_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3682..4593
DNA (912bp) protein (304aa)
sugar dehydrogenase (EC:1.1.1.-)
Probable oxidoreductase (Aldo-keto reductase family protein) {ECO:0000313|EMBL:CAI50372.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50372.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halob
Probable oxidoreductase (Aldo-keto reductase family protein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND1_NATPD
qh_9_scaffold_3387_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4551..5207
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQV9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36504.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_9_scaffold_3387_7

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comp(5209..5868)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0T1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06176.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_9_scaffold_3387_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6303..7106
DNA (804bp) protein (268aa)
fadA_5; enoyl-CoA hydratase I 5 (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAI48822.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAI48822.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR3_NATPD
qh_9_scaffold_3387_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7253..7771
DNA (519bp) protein (173aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR4_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48821.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_9_scaffold_3387_10
unknown

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7772..7969
DNA (198bp) protein (66aa)

This feature has no annotations

qh_9_scaffold_3387_11
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

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8894..9172
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:JAF47931.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae
Uncharacterized protein id=3779679 bin=GWA2_Methylomirabilis_73_35 species=Zea mays genus=Zea taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
qh_9_scaffold_3387_12
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9306..9407)
DNA (102bp) protein (34aa)
aatC; aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IW39_9EURY
qh_9_scaffold_3387_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9691..10095
DNA (405bp) protein (135aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRP2_NATPD
tfbA_2; transcription initiation factor TFB 2
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Displaying 13 items

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