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QH_9_Halobacteriales_69_42

In projects: QH_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_9_UNK

Properties

Avg. coverage: 42.30 Longest contig: 16.90 Kbp Bin length: 2.92 Mbp GC content: 68.84 %
Contigs count: 574 Features count: 3456 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 10 / 55 MC: 1 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 8
Displaying items 101-150 of 574 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_7280
Genus: Natronomonas (50%)
4 3272 bp 73.59 53.03 91.78
qh_9_scaffold_10708
Class: Halobacteria (66.67%)
3 3367 bp 74.87 41.25 91.77
qh_9_scaffold_3285
Order: Halobacteriales (66.67%)
3 3619 bp 70.82 32.96 91.77
qh_9_scaffold_1100
Class: Halobacteria (85.71%)
7 6534 bp 64.72 44.05 91.74
qh_9_scaffold_7670
Genus: Natronomonas (77.78%)
9 5050 bp 71.43 55.49 91.72
qh_9_scaffold_8835
Order: Halobacteriales (66.67%)
3 3170 bp 68.39 45.58 91.70
qh_9_scaffold_2687
Order: Natrialbales (50%)
6 4026 bp 70.99 48.71 91.65
qh_9_scaffold_6596
Order: Halobacteriales (83.33%)
6 3695 bp 69.07 38.46 91.58
qh_9_scaffold_4362
Species: Natronomonas moolapensis (66.67%)
3 3097 bp 70.62 58.12 91.54
qh_9_scaffold_8468
Class: Halobacteria (50%)
4 3664 bp 71.07 57.31 91.54
qh_9_scaffold_2053
Species: Natronomonas pharaonis (60%)
5 5083 bp 70.77 54.30 91.48
qh_9_scaffold_7756
Phylum: Euryarchaeota (60%)
5 5071 bp 66.48 48.00 91.46
qh_9_scaffold_2562
Species: Natronomonas moolapensis (50%)
4 4120 bp 68.47 49.15 91.46
qh_9_scaffold_8767
Class: Halobacteria (80%)
5 3441 bp 67.95 44.14 91.46
qh_9_scaffold_3142
Order: Halobacteriales (60%)
5 5229 bp 72.40 41.16 91.45
qh_9_scaffold_1906
Order: Halobacteriales (80%)
5 6884 bp 70.95 53.34 91.30
qh_9_scaffold_9034
Genus: Natronomonas (80%)
5 3067 bp 70.36 40.33 91.26
qh_9_scaffold_2928
Class: Halobacteria (50%)
4 5158 bp 65.63 13.01 91.26
qh_9_scaffold_2832
Class: Halobacteria (66.67%)
9 5538 bp 70.57 41.82 91.22
qh_9_scaffold_5852 3 3819 bp 54.49 24.90 91.20
qh_9_scaffold_7104
Class: Halobacteria (80%)
5 3304 bp 63.04 35.56 91.16
qh_9_scaffold_827
Species: Natronomonas pharaonis (50%)
8 8249 bp 67.18 36.47 91.07
qh_9_scaffold_13829
Species: Natronomonas pharaonis (50%)
4 3978 bp 68.40 44.56 91.03
qh_9_scaffold_8046
Genus: Natronomonas (50%)
6 4173 bp 71.00 49.39 91.01
qh_9_scaffold_1403
Order: Halobacteriales (50%)
12 11182 bp 70.94 50.83 90.95
qh_9_scaffold_3674
Species: Natronomonas moolapensis (60%)
5 5136 bp 72.04 43.43 90.95
qh_9_scaffold_4216
Species: Natronomonas moolapensis (60%)
5 5013 bp 66.73 43.23 90.90
qh_9_scaffold_8071
Genus: Natronomonas (80%)
5 3734 bp 68.05 38.56 90.79
qh_9_scaffold_2383
Order: Halobacteriales (60%)
10 7867 bp 72.86 40.74 90.72
qh_9_scaffold_1660
Order: Halobacteriales (71.43%)
7 5248 bp 65.57 38.09 90.72
qh_9_scaffold_4991
Genus: Natrinema (60%)
5 5037 bp 76.04 44.41 90.71
qh_9_scaffold_13964
Order: Halobacteriales (66.67%)
3 3242 bp 66.19 31.46 90.59
qh_9_scaffold_1608
Order: Halobacteriales (70%)
10 9046 bp 71.42 46.25 90.57
qh_9_scaffold_11635
Order: Natrialbales (60%)
5 4124 bp 70.13 51.76 90.57
qh_9_scaffold_3689
Species: Natrinema sp. J7-2 (50%)
2 3389 bp 65.51 33.05 90.56
qh_9_scaffold_7192
Species: Natronomonas moolapensis (50%)
4 3138 bp 71.10 44.46 90.54
qh_9_scaffold_4895
Genus: Natronomonas (75%)
8 4587 bp 68.43 45.45 90.52
qh_9_scaffold_4013
Order: Halobacteriales (80%)
5 3245 bp 71.03 47.73 90.51
qh_9_scaffold_4535
Species: Natronomonas pharaonis (50%)
4 3030 bp 71.98 46.44 90.50
qh_9_scaffold_7440
Species: Natronococcus amylolyticus (50%)
2 3070 bp 68.18 38.05 90.49
qh_9_scaffold_6313
Species: Natronomonas moolapensis (50%)
4 3401 bp 67.19 39.02 90.41
qh_9_scaffold_11394
Genus: Natronomonas (50%)
6 4274 bp 72.44 36.76 90.41
qh_9_scaffold_4896
Genus: Natronomonas (50%)
6 5238 bp 67.72 38.51 90.38
qh_9_scaffold_1003
Species: Natronomonas moolapensis (62.5%)
8 7752 bp 71.13 41.86 90.36
qh_9_scaffold_1500
Order: Natrialbales (80%)
5 5519 bp 68.49 56.42 90.34
qh_9_scaffold_3427
Genus: Natronomonas (75%)
12 10218 bp 67.79 44.22 90.28
qh_9_scaffold_1604
Order: Natrialbales (64.29%)
14 15251 bp 72.15 40.40 90.13
qh_9_scaffold_10152
Species: Haloarcula japonica (50%)
6 5066 bp 65.99 17.47 90.13
qh_9_scaffold_1579
Order: Halobacteriales (62.5%)
8 5399 bp 56.03 22.78 90.07
qh_9_scaffold_4487
Species: Natronomonas pharaonis (50%)
4 3048 bp 60.40 29.07 90.06
Displaying items 101-150 of 574 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.