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QH_9_Halobacteriales_69_42

In projects: QH_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_9_UNK

Properties

Avg. coverage: 42.30 Longest contig: 16.90 Kbp Bin length: 2.92 Mbp GC content: 68.84 %
Contigs count: 574 Features count: 3456 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 10 / 55 MC: 1 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 8
Displaying items 401-450 of 574 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_6599
Species: Natronomonas pharaonis (66.67%)
6 5108 bp 71.01 38.31 89.51
qh_9_scaffold_5960
Order: Halobacteriales (50%)
4 3102 bp 68.15 38.30 95.36
qh_9_scaffold_3866
Order: Halobacteriales (100%)
3 3314 bp 69.61 38.30 76.77
qh_9_scaffold_5478
Genus: Natronomonas (50%)
4 3741 bp 68.16 38.28 76.90
qh_9_scaffold_7327
Order: Halobacteriales (50%)
4 3502 bp 59.42 38.12 75.30
qh_9_scaffold_1660
Order: Halobacteriales (71.43%)
7 5248 bp 65.57 38.09 90.72
qh_9_scaffold_7440
Species: Natronococcus amylolyticus (50%)
2 3070 bp 68.18 38.05 90.49
qh_9_scaffold_6239
Order: Halobacteriales (57.14%)
7 5784 bp 67.00 38.02 84.65
qh_9_scaffold_2933
Order: Halobacteriales (80%)
5 3840 bp 69.01 37.97 61.88
qh_9_scaffold_2906
Domain: Archaea (66.67%)
3 3863 bp 63.89 37.90 82.86
qh_9_scaffold_5986
Class: Halobacteria (77.78%)
9 6688 bp 67.34 37.83 88.05
qh_9_scaffold_1071
Genus: Natronomonas (50%)
8 6657 bp 69.21 37.79 87.61
qh_9_scaffold_4099
Species: Natronomonas pharaonis (50%)
8 5849 bp 68.23 37.75 78.22
qh_9_scaffold_6423
Species: Haloquadratum walsbyi (50%)
4 4645 bp 72.87 37.74 101.08
qh_9_scaffold_1401
Order: Halobacteriales (62.5%)
8 7098 bp 64.51 37.67 79.37
qh_9_scaffold_3241
Genus: Natronomonas (70%)
10 5657 bp 66.61 37.65 77.64
qh_9_scaffold_3262
Order: Halobacteriales (66.67%)
6 4134 bp 68.77 37.61 84.03
qh_9_scaffold_1709
Genus: Natronomonas (50%)
6 6082 bp 69.78 37.60 73.15
qh_9_scaffold_10584
Order: Halobacteriales (75%)
4 4513 bp 75.36 37.49 70.26
qh_9_scaffold_5904
Class: Halobacteria (66.67%)
9 7464 bp 63.08 37.46 75.84
qh_9_scaffold_526
Class: Halobacteria (85.71%)
14 15100 bp 69.11 37.42 94.11
qh_9_scaffold_3207
Genus: Natronomonas (66.67%)
12 7824 bp 64.62 37.35 72.51
qh_9_scaffold_6906
Species: Natronomonas pharaonis (66.67%)
6 3520 bp 63.72 37.33 75.00
qh_9_scaffold_3094 8 6501 bp 68.70 37.33 75.68
qh_9_scaffold_3932
Species: Natronomonas pharaonis (50%)
4 3283 bp 69.57 37.31 70.82
qh_9_scaffold_1414
Class: Halobacteria (76.47%)
17 13993 bp 70.14 37.23 89.81
qh_9_scaffold_5928
Order: Halobacteriales (50%)
8 4661 bp 61.45 37.22 74.15
qh_9_scaffold_5371
Species: Natronomonas pharaonis (60%)
5 3598 bp 67.32 37.16 79.88
qh_9_scaffold_1674
Genus: Halococcus (83.33%)
6 5232 bp 65.35 37.06 96.39
qh_9_scaffold_983 10 7013 bp 65.54 37.05 76.49
qh_9_scaffold_11871
Order: Halobacteriales (80%)
5 3035 bp 61.29 37.00 82.24
qh_9_scaffold_11394
Genus: Natronomonas (50%)
6 4274 bp 72.44 36.76 90.41
qh_9_scaffold_14416
Domain: Archaea (66.67%)
3 3897 bp 67.39 36.72 52.35
qh_9_scaffold_6027
Genus: Natronomonas (50%)
6 4346 bp 70.41 36.68 78.69
qh_9_scaffold_10494
Class: Halobacteria (66.67%)
6 3574 bp 70.73 36.63 72.94
qh_9_scaffold_4571
Class: Halobacteria (80%)
5 4856 bp 72.96 36.57 82.72
qh_9_scaffold_3886
Class: Halobacteria (60%)
5 3729 bp 65.46 36.55 70.07
qh_9_scaffold_3773
Order: Halobacteriales (71.43%)
7 6341 bp 67.92 36.54 83.41
qh_9_scaffold_4792
Genus: Natronomonas (50%)
4 3967 bp 63.15 36.53 78.95
qh_9_scaffold_9873
Order: Halobacteriales (50%)
4 3151 bp 65.03 36.50 67.88
qh_9_scaffold_827
Species: Natronomonas pharaonis (50%)
8 8249 bp 67.18 36.47 91.07
qh_9_scaffold_3971
Order: Halobacteriales (75%)
4 3264 bp 69.27 36.46 85.75
qh_9_scaffold_6189
Class: Halobacteria (91.67%)
12 9101 bp 65.96 36.44 63.32
qh_9_scaffold_3628
Genus: Natronomonas (50%)
4 3854 bp 70.47 36.25 94.27
qh_9_scaffold_1898
Order: Haloferacales (50%)
4 5361 bp 69.02 36.22 89.42
qh_9_scaffold_4133
Species: halophilic archaeon DL31 (60%)
5 4646 bp 70.25 36.07 74.52
qh_9_scaffold_5449
Order: Halobacteriales (66.67%)
3 3534 bp 72.41 35.99 66.89
qh_9_scaffold_6278
Order: Halobacteriales (60%)
5 3431 bp 56.86 35.97 83.15
qh_9_scaffold_5136
Species: Natronomonas pharaonis (57.14%)
7 5958 bp 70.98 35.92 71.75
qh_9_scaffold_3480
Species: Natronomonas pharaonis (50%)
6 4017 bp 73.01 35.87 81.63
Displaying items 401-450 of 574 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.