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qh_9_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_90_1

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50..376
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E3335
Uncharacterized protein {ECO:0000313|EMBL:KKN62903.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase beta domain-containing protein
qh_9_scaffold_90_2
unknown

Not on your lists

comp(514..732)
DNA (219bp) protein (73aa)

This feature has no annotations

qh_9_scaffold_90_3
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

807..1001
DNA (195bp) protein (65aa)
DNA polymerase beta domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
qh_9_scaffold_90_4
unknown

Not on your lists

1058..1222
DNA (165bp) protein (55aa)

This feature has no annotations

qh_9_scaffold_90_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1414..1668
DNA (255bp) protein (85aa)
rpmE; 50S ribosomal protein L31
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=24659103 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_9_scaffold_90_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1839..2639)
DNA (801bp) protein (267aa)
3-oxoacyl-[acyl-carrier-protein] reductase 1 (3-ketoacyl-acyl carrier protein reductase 1) n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RMZ6_PAEP6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD02210.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
qh_9_scaffold_90_7
unknown

Not on your lists

2837..3019
DNA (183bp) protein (61aa)

This feature has no annotations

qh_9_scaffold_90_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3108..4454
DNA (1347bp) protein (449aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752, ECO:0000313|EMBL:CBH23990.1}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=761659 species="Bacteria; Bacteroidetes
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7I5_SALRM
sun; ribosomal RNA small subunit methyltransferase B
qh_9_scaffold_90_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4506..5510
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S462_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45101.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5634..6347
DNA (714bp) protein (238aa)
TonB family protein
TonB family protein; K03832 periplasmic protein TonB id=24657895 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB family C-terminal domain protein {ECO:0000313|EMBL:ABC44721.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_9_scaffold_90_11
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6750..8459
DNA (1710bp) protein (570aa)
Serine protease n=1 Tax=Rhodopirellula baltica WH47 RepID=F2B0R9_RHOBT
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
peptidase S8/S53 subtilisin kexin sedolisin
qh_9_scaffold_90_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8764..10761
DNA (1998bp) protein (666aa)
Pyruvate dehydrogenase beta subunit {ECO:0000313|EMBL:CBH25103.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBH25103.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyruvate dehydrogenase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP8_SALRM
bkdA2; Pyruvate dehydrogenase beta subunit
qh_9_scaffold_90_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11018..11368
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24657893 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25102.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11399..13768)
DNA (2370bp) protein (790aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1L9_SALRD
glutaminyl-tRNA synthetase
qh_9_scaffold_90_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13997..14500)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA72_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14647..15684)
DNA (1038bp) protein (346aa)
arginine/ornithine transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] id=24659754 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABC45690.1}; EC=2.7.-.- {ECO:0000313|EMBL:ABC45690.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
arginine/ornithine transport system ATPase
qh_9_scaffold_90_17
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16038..16544)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VKQ0_9CYAN
protein of unknown function DUF820
Uncharacterized protein {ECO:0000313|EMBL:AFZ08673.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
qh_9_scaffold_90_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16573..18732)
DNA (2160bp) protein (720aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CBH24925.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24925.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Methylmalonyl-CoA mutase large subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA70_SALRM
mutB; methylmalonyl-CoA mutase large subunit
qh_9_scaffold_90_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18797..20866)
DNA (2070bp) protein (690aa)
mutA; methylmalonyl-CoA mutase small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] id=24659752 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:CBH24924.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24924.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
mutA; methylmalonyl-CoA mutase small subunit
qh_9_scaffold_90_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21031..21591)
DNA (561bp) protein (187aa)
methyltransferase
hypothetical protein id=24656806 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
SpoU rRNA methylase family protein {ECO:0000313|EMBL:ABC45198.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_9_scaffold_90_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21932..22546
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45506.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22715..23299
DNA (585bp) protein (195aa)
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:
Cytidylate kinase n=2 Tax=Salinibacter ruber RepID=KCY_SALRD
cmk; cytidylate kinase
qh_9_scaffold_90_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


23670..26231
DNA (2562bp) protein (854aa)
30S ribosomal protein S1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA65_SALRM
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CBH24920.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_9_scaffold_90_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26304..27809
DNA (1506bp) protein (502aa)
NAD-dependent malic enzyme {ECO:0000313|EMBL:ABC44896.1}; EC=1.1.1.38 {ECO:0000313|EMBL:ABC44896.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
NAD-dependent malic enzyme n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M8_SALRD
NAD-dependent malic enzyme
qh_9_scaffold_90_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27858..28631
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA63_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24918.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28641..28991
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24659745 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43979.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29163..29465
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein id=24659744 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24916.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_90_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29578..31071)
DNA (1494bp) protein (498aa)
Aldehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA60_SALRM
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_9_scaffold_90_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31248..32453
DNA (1206bp) protein (402aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CBH24914.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBH24914.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
Aspartate aminotransferase n=2 Tax=Salinibacter ruber RepID=Q2S1N3_SALRD
aspC; aspartate aminotransferase
qh_9_scaffold_90_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32633..33607
DNA (975bp) protein (325aa)
prfB; peptide chain release factor 2
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=24659741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
Displaying items 1-30 of 43 in total

View Taxonomy