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qh_9_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_219_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..297
DNA (297bp) protein (99aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL42_NATM8
tfbA_3; transcription initiation factor TFB 3
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_9_scaffold_219_2
unknown

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398..841
DNA (444bp) protein (148aa)

This feature has no annotations

qh_9_scaffold_219_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1412..2302)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS92053.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qh_9_scaffold_219_4

Not on your lists

2560..2916
DNA (357bp) protein (119aa)
Putative flavin-nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZKR5_9ARCH
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:ESS02965.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qh_9_scaffold_219_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3222..4355
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNW1_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66392.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qh_9_scaffold_219_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4216..4491)
DNA (276bp) protein (92aa)
KEOPS complex subunit Pcc1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0S2_NATM8
pcc1; KEOPS complex subunit Pcc1
KEOPS complex subunit Pcc1 {ECO:0000313|EMBL:CCQ36075.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensi
qh_9_scaffold_219_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4517..4651)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P n=2 Tax=Halococcus RepID=M0MY32_HALMO
qh_9_scaffold_219_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4654..4917)
DNA (264bp) protein (88aa)
50S ribosomal protein L37Ae n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBN1_HALXS
ribosomal L37ae protein
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qh_9_scaffold_219_9
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5011..5340
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W075_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF98951.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_9_scaffold_219_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5337..6059)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qh_9_scaffold_219_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6250..7575)
DNA (1326bp) protein (442aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUD_NATPD
qh_9_scaffold_219_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7633..9159
DNA (1527bp) protein (509aa)
phr3; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG81_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ22261.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
qh_9_scaffold_219_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9156..9290)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7JR83_NATPD
Uncharacterized protein {ECO:0000313|EMBL:CCI69587.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_9_scaffold_219_14
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9436..9978)
DNA (543bp) protein (181aa)
hypothetical protein id=24624485 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG99879.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
qh_9_scaffold_219_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10188..11249
DNA (1062bp) protein (354aa)
NADPH dehydrogenase (OLD yellow enzyme); 2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34 1.6.99.1)
NamA family oxidoreductase (Homolog to old yellow enzyme) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF4_NATPD
NamA family oxidoreductase {ECO:0000313|EMBL:CAI50704.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
qh_9_scaffold_219_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11306..11644)
DNA (339bp) protein (113aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CCQ36081.1}; EC=3.1.1.29 {ECO:0000313|EMBL:CCQ36081.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Peptidyl-tRNA hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPX2_NATM8
qh_9_scaffold_219_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11733..12329
DNA (597bp) protein (199aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=543526 s
Probable deoxycytidine triphosphate deaminase n=2 Tax=Haloterrigena RepID=D2RQM5_HALTV
deoxycytidine triphosphate deaminase
qh_9_scaffold_219_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12326..13222
DNA (897bp) protein (299aa)
thiN1; HTH domain protein / thiamine-phosphate synthase (EC:2.5.1.3) rbh
HTH domain protein / thiamine-phosphate synthase {ECO:0000313|EMBL:CCQ37992.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CCQ37992.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
HTH domain protein / thiamine-phosphate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTX0_NATM8
qh_9_scaffold_219_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13222..13884
DNA (663bp) protein (221aa)
S-adenosylmethionine-dependent methyltransferase 3 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI50676.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50676.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI2_NATPD
qh_9_scaffold_219_20
unknown

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13915..14310
DNA (396bp) protein (132aa)

This feature has no annotations

qh_9_scaffold_219_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14597..15763
DNA (1167bp) protein (389aa)
Transposase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JVU8_HALVA
Transposase {ECO:0000313|EMBL:EMA11785.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
transposase, IS605 OrfB family, central region
qh_9_scaffold_219_22
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(16048..16650)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUT3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71843.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qh_9_scaffold_219_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16652..16891)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK71_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35372.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_9_scaffold_219_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17220..18494)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNU2_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ67556.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
qh_9_scaffold_219_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18573..19343)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50677.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_9_scaffold_219_26
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19355..20206)
DNA (852bp) protein (284aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LXM7_9EURY
thiazole-adenylate synthase
qh_9_scaffold_219_27
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20253..20708)
DNA (456bp) protein (152aa)
Histidine kinase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RRQ3_HALTV
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADB62520.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC
qh_9_scaffold_219_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20819..21268)
DNA (450bp) protein (150aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
HTR-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPH6_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA09575.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;
qh_9_scaffold_219_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21488..22105)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U2K7_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ42818.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
htlD; Htr-like protein
qh_9_scaffold_219_30
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22197..22673)
DNA (477bp) protein (159aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NUI5_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA61228.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum koc
membrane-bound metal-dependent hydrolase
Displaying items 1-30 of 37 in total

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