ggKbase home page

qh_9_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_207_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..588
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05209.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_9_scaffold_207_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(605..1198)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_207_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1258..1848
DNA (591bp) protein (197aa)
Methyl transferase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9E7_9EURY
Methyl transferase-like protein {ECO:0000313|EMBL:EMA53280.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
methyltransferase type 11
qh_9_scaffold_207_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1968..2393
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N828_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53279.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_207_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2409..2768)
DNA (360bp) protein (120aa)
Ferredoxin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6U4_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA53278.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
fdx; ferredoxin
qh_9_scaffold_207_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2752..4149)
DNA (1398bp) protein (466aa)
Selenium-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S0_9EURY
Selenium-binding protein {ECO:0000313|EMBL:EMA53277.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
selenium-binding protein
qh_9_scaffold_207_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4287..5039)
DNA (753bp) protein (251aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ1_9EURY
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EMA44775.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
peptidase S9 prolyl oligopeptidase active site domain protein
qh_9_scaffold_207_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5006..6127)
DNA (1122bp) protein (374aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ1_9EURY
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EMA44775.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
peptidase S9 prolyl oligopeptidase active site domain protein
qh_9_scaffold_207_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6346..7419)
DNA (1074bp) protein (358aa)
Methionine synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9E4_9EURY
Methionine synthase {ECO:0000313|EMBL:EMA53275.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
vitamin-B12 independent methionine synthase
qh_9_scaffold_207_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7416..8438)
DNA (1023bp) protein (341aa)
metE_2; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGB6_9EURY
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EMA44777.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
qh_9_scaffold_207_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8707..11331)
DNA (2625bp) protein (875aa)
Copper-transporting ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNK8_9EURY
Copper-transporting ATPase {ECO:0000313|EMBL:EMA46000.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
copper-transporting ATPase
qh_9_scaffold_207_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11717..11887
DNA (171bp) protein (57aa)
Putative cation binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JCW3_9EURY
Putative cation binding protein {ECO:0000313|EMBL:EJN56964.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
copper chaperone
qh_9_scaffold_207_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12004..12342)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAX9_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16432.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_9_scaffold_207_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12492..12770
DNA (279bp) protein (93aa)
Putative transcriptional regulator, AsnC family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK12_9EURY
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:EMA46012.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
putative transcriptional regulator, AsnC family protein
qh_9_scaffold_207_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13417..13986)
DNA (570bp) protein (190aa)
Methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ74_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA47877.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
methyltransferase
qh_9_scaffold_207_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13986..15149)
DNA (1164bp) protein (388aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
mechanosensitive ion channel MscS
qh_9_scaffold_207_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15277..15429)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49054.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_9_scaffold_207_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15520..16398)
DNA (879bp) protein (293aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
qh_9_scaffold_207_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16478..17065)
DNA (588bp) protein (196aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
qh_9_scaffold_207_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17105..17461)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY
RNA polymerase Rpb4
qh_9_scaffold_207_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17458..17748)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT09_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
qh_9_scaffold_207_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17831..18097)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTU2_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122745
ef1B; elongation factor 1-beta
qh_9_scaffold_207_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18100..18285)
DNA (186bp) protein (62aa)
Zn-ribbon RNA-binding protein n=2 Tax=Halococcus RepID=M0MQH5_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:EMA47886.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
hypothetical protein
qh_9_scaffold_207_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18429..19655)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49061.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_207_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19660..20616)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3U0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_9_scaffold_207_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20979..21623
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW72_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA49064.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
qh_9_scaffold_207_27
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22330..22887
DNA (558bp) protein (186aa)
DNA-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036B78F7
Response regulator receiver protein {ECO:0000313|EMBL:ELZ40028.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
response regulator receiver protein
qh_9_scaffold_207_28
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22902..23216)
DNA (315bp) protein (105aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Circadian clock protein, KaiC n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4Y1_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ42841.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
qh_9_scaffold_207_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23191..24384)
DNA (1194bp) protein (398aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPJ9_HALLT
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ42841.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
qh_9_scaffold_207_30

Not on your lists

24655..25905
DNA (1251bp) protein (417aa)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X731_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS03494.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
histidine kinase
Displaying items 1-30 of 31 in total

View Taxonomy