ggKbase home page

qh_9_scaffold_488

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_488_1
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(200..607)
DNA (408bp) protein (136aa)
id=24654456 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654456 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
qh_9_scaffold_488_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1140..1526
DNA (387bp) protein (129aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227455 species="Archaea
Tryptophan--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL5_9EURY
tryptophanyl-tRNA synthetase
qh_9_scaffold_488_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1781..2092)
DNA (312bp) protein (104aa)
Oxidoreductase FAD-binding domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXI1_9EURY
Oxidoreductase FAD-binding domain-containing protein {ECO:0000313|EMBL:EMA50003.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
oxidoreductase FAD/NAD(P)-binding domain protein
qh_9_scaffold_488_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2099..2929)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BTC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ13367.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_9_scaffold_488_5
unknown

Not on your lists

comp(3197..3475)
DNA (279bp) protein (93aa)

This feature has no annotations

qh_9_scaffold_488_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3804..5300
DNA (1497bp) protein (499aa)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA43174.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA43174.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MES7_9EURY
pheS; phenylalanyl-tRNA synthetase subunit alpha
qh_9_scaffold_488_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5300..7042
DNA (1743bp) protein (581aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N037_9EURY
qh_9_scaffold_488_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7062..7850)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31580.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_9_scaffold_488_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7888..8940)
DNA (1053bp) protein (351aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:000025
pyrD; dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWR8_9EURY
qh_9_scaffold_488_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8980..9177)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MRR5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA53028.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_9_scaffold_488_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9445..9759
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCV4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43178.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
nonhistone chromosomal protein
qh_9_scaffold_488_16S_1
unknown

Not on your lists

10469..11384
DNA (916bp)
Halococcus 99% - BLAST Kari Finstad (4/6/15)
Displaying 12 items

View Taxonomy