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qh_9_scaffold_270

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_270_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1178)
DNA (1176bp) protein (392aa)
UvrABC system protein C n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEJ0_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1227456 species="A
uvrC; excinuclease ABC subunit C
qh_9_scaffold_270_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1206..1562)
DNA (357bp) protein (119aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
transcriptional regulator, IclR family
qh_9_scaffold_270_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1723..2358)
DNA (636bp) protein (212aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
cbp; calcium-binding protein
qh_9_scaffold_270_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2501..3133)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55093.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_9_scaffold_270_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3732..5888)
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227456 species="Archaea
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAV6_9EURY
qh_9_scaffold_270_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6033..6284)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N676_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52195.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_9_scaffold_270_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6448..8265)
DNA (1818bp) protein (606aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2U9_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor eaIF-5B
qh_9_scaffold_270_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8339..9388)
DNA (1050bp) protein (350aa)
Brp-like protein-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQW2_HALVA
Brp-like protein-like protein {ECO:0000313|EMBL:EMA11381.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
blh; Brp-like protein-like
qh_9_scaffold_270_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9379..10170)
DNA (792bp) protein (264aa)
lycopene cyclase n=1 Tax=Halomicrobium katesii RepID=UPI00037F68E7
lycopene cyclase domain-containing protein
Lycopene cyclase domain protein {ECO:0000313|EMBL:ACV47405.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qh_9_scaffold_270_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10342..11139)
DNA (798bp) protein (266aa)
Cruxrhodopsin n=2 Tax=Haloarcula japonica RepID=Q9YGB7_HALJP
Cruxrhodopsin {ECO:0000313|EMBL:BAA81816.1}; Flags: Precursor;; TaxID=29282 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica.
rhodopsin
qh_9_scaffold_270_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11319..13028)
DNA (1710bp) protein (570aa)
Bacterio-opsin activator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3G3_HALJB
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:ADJ15270.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qh_9_scaffold_270_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13260..13754)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CN55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23309.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_9_scaffold_270_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14013..14309
DNA (297bp) protein (99aa)
PRC-barrel domain-containing protein n=2 Tax=Halococcus RepID=M0MEP5_9EURY
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EMA52197.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
PRC-barrel domain-containing protein
qh_9_scaffold_270_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14309..14767
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43133.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DNA-binding protein
qh_9_scaffold_270_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14790..15554)
DNA (765bp) protein (255aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N500_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA52199.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
CAAX amino terminal protease family protein
qh_9_scaffold_270_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15637..16698)
DNA (1062bp) protein (354aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
qh_9_scaffold_270_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16910..17506
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43130.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_270_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17576..18091
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43129.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_270_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18873..19817
DNA (945bp) protein (315aa)
Pre-peptidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK4_9EURY
Pre-peptidase {ECO:0000313|EMBL:EMA43126.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
alpha-1,6-glucosidase
qh_9_scaffold_270_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19902..20759
DNA (858bp) protein (286aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N685_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
preprotein translocase subunit SecF
qh_9_scaffold_270_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20756..21091
DNA (336bp) protein (112aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
Displaying 21 items

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