ggKbase home page

qh_9_scaffold_768

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_768_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3..464)
DNA (462bp) protein (154aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1227456 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWN1_9EURY
qh_9_scaffold_768_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(531..887)
DNA (357bp) protein (119aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
qh_9_scaffold_768_3
unknown

Not on your lists

comp(941..1225)
DNA (285bp) protein (95aa)

This feature has no annotations

qh_9_scaffold_768_4
unknown

Not on your lists

comp(1679..2026)
DNA (348bp) protein (116aa)

This feature has no annotations

qh_9_scaffold_768_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2092..3516)
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXE3_9EURY
dihydrolipoamide dehydrogenase
qh_9_scaffold_768_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3633..4625
DNA (993bp) protein (331aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0J2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA38129.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase of unknown substrate specificity
qh_9_scaffold_768_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4674..6272)
DNA (1599bp) protein (533aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA43149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
catalytic domain of components of various dehydrogenase complexes
qh_9_scaffold_768_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6274..7287)
DNA (1014bp) protein (338aa)
Transketolase central region n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N015_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA49990.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
qh_9_scaffold_768_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7291..8508)
DNA (1218bp) protein (406aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBM7_9EURY
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha {ECO:0000313|EMBL:EMA43151.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
qh_9_scaffold_768_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8628..9578)
DNA (951bp) protein (317aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ7_9EURY
lipoate synthase
qh_9_scaffold_768_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9739..11151
DNA (1413bp) protein (471aa)
MATE efflux family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS9_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA43153.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
MATE efflux family protein
qh_9_scaffold_768_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11158..11538
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48312.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_9_scaffold_768_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11724..14054
DNA (2331bp) protein (777aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF6_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA43155.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain-containing protein
qh_9_scaffold_768_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14548..15408
DNA (861bp) protein (287aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU4_9EURY
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:EMA43168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
DNA topoisomerase type IA Zn finger domain protein
qh_9_scaffold_768_15
unknown

Not on your lists

comp(15246..15584)
DNA (339bp) protein (113aa)

This feature has no annotations

qh_9_scaffold_768_16
unknown

Not on your lists

comp(15660..16169)
DNA (510bp) protein (170aa)

This feature has no annotations

qh_9_scaffold_768_17
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16194..16982
DNA (789bp) protein (263aa)
Uncharacterized protein (Fragment) n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CBX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20791.1}; Flags: Fragment;; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
hypothetical protein
qh_9_scaffold_768_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17053..18093
DNA (1041bp) protein (347aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227456 species="Archaea
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS7_9EURY
qh_9_scaffold_768_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18098..18805)
DNA (708bp) protein (236aa)
Type 11 methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N032_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:EMA50000.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
trans-aconitate 2-methyltransferase
qh_9_scaffold_768_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18802..19176)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 20 items

View Taxonomy