ggKbase home page

qh_9_scaffold_349

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_349_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

qh_9_scaffold_349_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

284..1018
DNA (735bp) protein (245aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDG5_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA55129.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
Bacterio-opsin activator HTH domain-containing protein
qh_9_scaffold_349_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1061..1438)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_9_scaffold_349_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2002..2910)
DNA (909bp) protein (303aa)
Alpha/beta fold family hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEJ0_9EURY
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EMA43753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
alpha/beta hydrolase fold protein
qh_9_scaffold_349_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3051..4607
DNA (1557bp) protein (519aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI00036129A0
amino acid/amide ABC transporter substrate-binding protein, haat family
Branched chain amino acid ABC transporter branched chain amino acid-binding protein {ECO:0000313|EMBL:ACV48634.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Haloba
qh_9_scaffold_349_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4611..5411
DNA (801bp) protein (267aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
amino acid/amide ABC transporter ATP-binding protein 1, haat family
qh_9_scaffold_349_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5408..6205
DNA (798bp) protein (266aa)
ABC transporter-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLV9_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:ELZ24260.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
ABC transporter
qh_9_scaffold_349_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6202..7230
DNA (1029bp) protein (343aa)
Branched-chain amino acid ABC transporter permease protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QPS5_9EURY
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:EFW93528.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;"
amino acid/amide ABC transporter membrane protein 1, haat family
qh_9_scaffold_349_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7319..8512
DNA (1194bp) protein (398aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK7_HALBP
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ADQ67059.1}; Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:ELY29606.1}; TaxID=46
qh_9_scaffold_349_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8671..9537
DNA (867bp) protein (289aa)
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA9_9EURY
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EMA43757.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
D-beta-hydroxybutyrate dehydrogenase
qh_9_scaffold_349_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9572..9910)
DNA (339bp) protein (113aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAY6_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA55127.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
acetyltransferase
qh_9_scaffold_349_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9949..10443)
DNA (495bp) protein (165aa)
bcp; thioredoxin-dependent hydroperoxide peroxidase (EC:1.11.1.15)
Thioredoxin-dependent hydroperoxide peroxidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB99_9EURY
Thioredoxin-dependent hydroperoxide peroxidase {ECO:0000313|EMBL:EMA55126.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
qh_9_scaffold_349_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10498..10689)
DNA (192bp) protein (64aa)
Thiamine biosynthesis protein ThiS ( sulfur donor) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEL4_9EURY
Thiamine biosynthesis protein ThiS ( sulfur donor) {ECO:0000313|EMBL:EMA55125.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
thiamine biosynthesis protein ThiS ( sulfur donor)
qh_9_scaffold_349_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10788..10955)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MGB9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43744.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_9_scaffold_349_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11079..11846
DNA (768bp) protein (256aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEM6_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EMA55140.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
purE; 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
qh_9_scaffold_349_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12154..12396
DNA (243bp) protein (81aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC41_9EURY
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EMA55138.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
Excinuclease ABC C subunit domain-containing protein
qh_9_scaffold_349_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12481..15258)
DNA (2778bp) protein (926aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA5_9EURY
qh_9_scaffold_349_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15405..15914
DNA (510bp) protein (170aa)
Tryptophan-rich sensory protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBA8_9EURY
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EMA42633.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
TspO and MBR-like protein
qh_9_scaffold_349_19
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15987..16391)
DNA (405bp) protein (135aa)
PIN domain protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q972K7_SULTO
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:BAB66159.1}; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 16993 /
qh_9_scaffold_349_20
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16342..16587)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A8V3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY94954.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
qh_9_scaffold_349_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16621..17598)
DNA (978bp) protein (326aa)
Replication factor C small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDG0_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12
DNA polymerase III, gamma/tau subunit
qh_9_scaffold_349_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17772..18866
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NED0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_9_scaffold_349_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18914..19462
DNA (549bp) protein (183aa)
NUDIX hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPP6_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EMA46704.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
NTP pyrophosphohydrolase
qh_9_scaffold_349_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19600..20928
DNA (1329bp) protein (443aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
archaeosine tRNA-ribosyltransferase (EC:2.4.2.-)
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
Displaying 24 items

View Taxonomy