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qh_9_scaffold_166

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_166_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

136..594
DNA (459bp) protein (153aa)
Fe-S metabolism protein SufE n=1 Tax=Salisaeta longa RepID=UPI0003B66E19
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:AEN73796.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qh_9_scaffold_166_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

708..2858
DNA (2151bp) protein (717aa)
sensory box histidine kinase/response regulator (EC:2.7.3.-)
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:CBH22851.1}; EC=2.7.3.- {ECO:0000313|EMBL:CBH22851.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Sensory box histidine kinase/response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW22_SALRM
qh_9_scaffold_166_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3188..3922
DNA (735bp) protein (245aa)
Light and redox sensing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF6_9EURY
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AJF27142.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_9_scaffold_166_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3976..4638)
DNA (663bp) protein (221aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B39127
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEN73795.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.
qh_9_scaffold_166_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4849..5310)
DNA (462bp) protein (154aa)
heat shock protein Hsp20 n=1 Tax=Salisaeta longa RepID=UPI0003B415E9
heat shock protein
Heat shock protein, family {ECO:0000313|EMBL:ABC45077.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_9_scaffold_166_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5614..6072)
DNA (459bp) protein (153aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
RNase H n=1 Tax=Salisaeta longa RepID=UPI0003B672EF
rnhA; ribonuclease HI
qh_9_scaffold_166_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6265..7287
DNA (1023bp) protein (341aa)
obgE; GTPase ObgE
obgE; GTPase ObgE; K03979 GTP-binding protein id=24659130 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_9_scaffold_166_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7378..8586
DNA (1209bp) protein (403aa)
DNA protecting protein DprA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK55_RHOMR
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:AEN72811.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qh_9_scaffold_166_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8676..9812
DNA (1137bp) protein (379aa)
Aminotransferase, class V superfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3B8_SALRD
aminotransferase
Aminotransferase, class V superfamily {ECO:0000313|EMBL:ABC46268.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_9_scaffold_166_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9868..10959
DNA (1092bp) protein (364aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
pseudouridine synthase n=1 Tax=Salisaeta longa RepID=UPI0003B4717D
rluD; ribosomal large subunit pseudouridine synthase D
qh_9_scaffold_166_11
unknown

Not on your lists

11018..11515
DNA (498bp) protein (166aa)

This feature has no annotations

qh_9_scaffold_166_12
unknown

Not on your lists

11508..11894
DNA (387bp) protein (129aa)

This feature has no annotations

qh_9_scaffold_166_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11899..12378
DNA (480bp) protein (160aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ48_RHOM4
PTS IIA-like nitrogen-regulatory protein PtsN
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ACY48506.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodotherm
qh_9_scaffold_166_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


12406..13815
DNA (1410bp) protein (470aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7D7_SALRM
hisS; histidyl-tRNA synthetase
qh_9_scaffold_166_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13927..14994
DNA (1068bp) protein (356aa)
Prolipoprotein diacylglyceryl transferase n=2 Tax=Rhodothermus marinus RepID=D0MJ46_RHOM4
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ACY48504.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source=
qh_9_scaffold_166_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15195..16034
DNA (840bp) protein (280aa)
tRNA/rRNA methyltransferase n=2 Tax=Salinibacter ruber RepID=D5H969_SALRM
spoU; tRNA/rRNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ABC45750.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qh_9_scaffold_166_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16166..17242)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0C6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91860.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
qh_9_scaffold_166_18
unknown

Not on your lists

comp(18230..18709)
DNA (480bp) protein (160aa)

This feature has no annotations

qh_9_scaffold_166_19
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19656..21020
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69E58
Gram-negative bacterial tonB protein {ECO:0000313|EMBL:EKB51119.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis
TonB family protein
qh_9_scaffold_166_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21077..22348)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25497.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_166_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22909..23796
DNA (888bp) protein (296aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1};; DNA-(apurinic or apyrimidinic site) lyase
Endonuclease III n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU3_SALRM
nth; endonuclease III
qh_9_scaffold_166_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23933..25468
DNA (1536bp) protein (512aa)
phosphoglyceromutase n=1 Tax=Salisaeta longa RepID=UPI0003B3FF5A
gpmI; phosphoglyceromutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
qh_9_scaffold_166_23
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25861..26586
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y739_9PORP
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KIA94417.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
rraA2; dimethylmenaquinone methyltransferase
qh_9_scaffold_166_24
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26636..27568
DNA (933bp) protein (311aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TQT0_BACCJ
SMP-30/gluconolaconase/LRE-like region-containing protein
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:ADU31705.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cell
qh_9_scaffold_166_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

28020..29402
DNA (1383bp) protein (461aa)
N-sulphoglucosamine sulphohydrolase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGC3_9BACT
sulfatase Tax=RBG_16_Planctomycetes_55_9_curated
sulfatase
qh_9_scaffold_166_26
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29590..30384
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thymidylate synthase n=1 Tax=Nesterenkonia alba RepID=UPI0003B44750
thymidylate synthase
qh_9_scaffold_166_27
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30450..31823
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPD3_9GAMM
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
qh_9_scaffold_166_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31865..32224
DNA (360bp) protein (120aa)
DNA polymerase V n=1 Tax=Salisaeta longa RepID=UPI0003B4E41C
recombinase RmuC
hypothetical protein; K09760 DNA recombination protein RmuC Tax=GWF2_Bacteroidetes_41_31_curated
qh_9_scaffold_166_29
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32282..32974
DNA (693bp) protein (231aa)
Helicase domain protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L7C3_MAGSM
helicase domain-containing protein
Helicase domain protein {ECO:0000313|EMBL:ABK43866.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus ma
Displaying 29 items

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