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qh_9_scaffold_336

Search features with annotation key words

Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_336_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..1091
DNA (1089bp) protein (363aa)
hypothetical protein
hypothetical protein id=24658421 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44516.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_336_2
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1111..3213)
DNA (2103bp) protein (701aa)
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein Tax=CG_Ignavi_02
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein id=12496186 bin=THIO_MID species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TonB-dependent receptor plug
qh_9_scaffold_336_3
unknown

Not on your lists

comp(3528..3950)
DNA (423bp) protein (141aa)

This feature has no annotations

qh_9_scaffold_336_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4067..6007
DNA (1941bp) protein (647aa)
UvrABC system protein C n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=UVRC_SALRD
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=309807 species="Ba
qh_9_scaffold_336_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6291..6830
DNA (540bp) protein (180aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZK8_SALRD
rfaY; RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABC46204.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_9_scaffold_336_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6827..7414
DNA (588bp) protein (196aa)
hypothetical protein
hypothetical protein id=24658473 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44139.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_336_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7387..8073)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93516.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_9_scaffold_336_8
Nocardia sp. ATCC 202099, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8179..8574)
DNA (396bp) protein (132aa)
Noc1 n=1 Tax=Nocardia sp. ATCC 202099 RepID=E5DUI7_9NOCA
Noc1 {ECO:0000313|EMBL:ADR01091.1}; TaxID=930400 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia sp. ATCC 202099.;"
hypothetical protein
qh_9_scaffold_336_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(8808..11156)
DNA (2349bp) protein (783aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954, ECO:0000313|EMBL:CBH24597.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
DNA gyrase subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H992_SALRM
gyrA; DNA gyrase subunit A
qh_9_scaffold_336_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11281..12033)
DNA (753bp) protein (251aa)
transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B36AC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24596.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_336_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12034..13089)
DNA (1056bp) protein (352aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF20_RHOMR
glycerol-3-phosphate dehydrogenase (NAD(P)+)
qh_9_scaffold_336_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13212..13901)
DNA (690bp) protein (230aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI51_RHOM4
acyl-phosphate glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
qh_9_scaffold_336_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14108..15124)
DNA (1017bp) protein (339aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B67D25
phosphoribosylformylglycinamidine cyclo-ligase
qh_9_scaffold_336_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15214..16089)
DNA (876bp) protein (292aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24592.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CBH24592.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Phytoene synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H987_SALRM
phytoene synthase
qh_9_scaffold_336_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16194..18233)
DNA (2040bp) protein (680aa)
Aconitate hydratase, putative {ECO:0000313|EMBL:ABC44618.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ABC44618.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
aconitate hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B609FC
aconitate hydratase
qh_9_scaffold_336_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18324..19190)
DNA (867bp) protein (289aa)
enoyl-CoA hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B75B22
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ABC44080.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qh_9_scaffold_336_17
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19237..19605)
DNA (369bp) protein (123aa)
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
HEPN domain protein id=4161595 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
HEPN domain-containing protein
qh_9_scaffold_336_18
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19656..19991)
DNA (336bp) protein (112aa)
DNA polymerase sigma n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9N8_9CYAN
DNA polymerase sigma Tax=CG_Syntroph_01
DNA polymerase sigma
qh_9_scaffold_336_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(20176..20391)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9I0_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01918.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qh_9_scaffold_336_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20466..20771)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6F5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45655.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_336_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(21012..21470)
DNA (459bp) protein (153aa)
twitching motility protein PilT id=14425074 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
twitching motility protein PilT Tax=CSP1_2_Dadabacteria
putative nucleic acid-binding protein, contains PIN domain
qh_9_scaffold_336_22
unknown

Not on your lists

comp(21446..21736)
DNA (291bp) protein (97aa)

This feature has no annotations

qh_9_scaffold_336_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21810..24710)
DNA (2901bp) protein (967aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
carB; carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=24658878 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
carB; carbamoyl-phosphate synthase large subunit
qh_9_scaffold_336_24
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(24753..25220)
DNA (468bp) protein (156aa)
hypothetical protein Tax=GWA2_WOR_2_45_18_curated
Putative uncharacterized protein id=4311513 bin=GWC2_OP3-like_45_7 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
qh_9_scaffold_336_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25409..26593)
DNA (1185bp) protein (395aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Salisaeta longa RepID=UPI0003B2F46E
carA; carbamoyl-phosphate synthase small subunit
qh_9_scaffold_336_26
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27053..28606)
DNA (1554bp) protein (518aa)
Acyltransferase WS/DGAT/MGAT family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLS0_ROSCS
acyltransferase
Acyltransferase WS/DGAT/MGAT family protein {ECO:0000313|EMBL:ABU58468.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sou
qh_9_scaffold_336_27
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28912..30660
DNA (1749bp) protein (583aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABM62913.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABM62913.1};; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectot
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI00037982E9
multi-sensor hybrid histidine kinase
qh_9_scaffold_336_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30688..31245)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7545F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73608.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_9_scaffold_336_29
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31446..32039
DNA (594bp) protein (198aa)
NLP/P60 protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHQ1_RHOM4
NLP/P60 protein
Glycoside hydrolase {ECO:0000313|EMBL:KHJ51989.1}; TaxID=115561 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas hydrothermalis
qh_9_scaffold_336_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32484..32987
DNA (504bp) protein (168aa)
greA; transcription elongation factor greA
greA; transcription elongation factor greA; K03624 transcription elongation factor GreA id=24659374 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=309807 species="Bacteria
Displaying items 1-30 of 51 in total

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