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qh_9_scaffold_28

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_28_1
unknown

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)

This feature has no annotations

qh_9_scaffold_28_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(801..2810)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4BD72
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24149.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_28_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2807..3838)
DNA (1032bp) protein (344aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFD5_RHOMR
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:AEN73950.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_9_scaffold_28_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3940..5385)
DNA (1446bp) protein (482aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
qh_9_scaffold_28_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5575..6789)
DNA (1215bp) protein (405aa)
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC46174.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC46174.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Peptidase, M50 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S3_SALRD
peptidase, M50 family protein
qh_9_scaffold_28_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7071..8213
DNA (1143bp) protein (381aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine-monophosphate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B43924
thiL; thiamine-monophosphate kinase
qh_9_scaffold_28_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8291..10036)
DNA (1746bp) protein (582aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCY1_RHOM4
PAS/PAC sensor signal transduction histidine kinase
qh_9_scaffold_28_8
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10064..15508)
DNA (5445bp) protein (1815aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00035E2B86
PAS fold family {ECO:0000313|EMBL:EDX77922.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420
multi-sensor hybrid histidine kinase
qh_9_scaffold_28_9
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

15848..16840
DNA (993bp) protein (331aa)
deoxyfructose oxidoreductase n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F35C4B
oxidoreductase domain-containing protein
oxidoreductase domain-containing protein Tax=CG_OP9-01
qh_9_scaffold_28_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16884..17993)
DNA (1110bp) protein (370aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01825}; EC=1.1.1.290 {ECO:0000255|HAMAP-Rule:MF_01825};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Erythronate-4-phosphate dehydrogenase n=2 Tax=Salinibacter ruber RepID=PDXB_SALRD
pdxB; erythronate-4-phosphate dehydrogenase
qh_9_scaffold_28_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18468..19181
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HB16_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43582.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_28_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19244..20299
DNA (1056bp) protein (352aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDG0_RHOM4
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACY47153.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
qh_9_scaffold_28_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20396..21154
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3FC82
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49407.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qh_9_scaffold_28_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21184..21819)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7771F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25222.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_28_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22018..23163
DNA (1146bp) protein (382aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFK6_RHOMR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEN72176.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qh_9_scaffold_28_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23241..24917)
DNA (1677bp) protein (559aa)
Na+/solute symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIS5_RHOM4
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qh_9_scaffold_28_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25011..25337)
DNA (327bp) protein (109aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_9_scaffold_28_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25464..27458)
DNA (1995bp) protein (665aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B4A533
acetate/CoA ligase
qh_9_scaffold_28_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27627..28388)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003736906
chorismate binding protein
Chorismate binding enzyme {ECO:0000313|EMBL:ABC46160.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_9_scaffold_28_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28452..29675)
DNA (1224bp) protein (408aa)
para-aminobenzoate synthase subunit I (EC:4.1.3.38 4.1.3.27)
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:AEN72693.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AEN72693.1};; EC=4.1.3.38 {ECO:0000313|EMBL:AEN72693.1};; TaxID=762570 species="Bacteria; Bacteroide
Para-aminobenzoate synthase, subunit I n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIR5_RHOMR
qh_9_scaffold_28_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29792..30649)
DNA (858bp) protein (286aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
qh_9_scaffold_28_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30714..32549)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6P4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23699.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_28_23
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(32600..33523)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5EE34
hypothetical protein Tax=CG_Arma_02
hypothetical protein
qh_9_scaffold_28_24
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33520..33735)
DNA (216bp) protein (72aa)
Uncharacterized protein id=2501454 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
qh_9_scaffold_28_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34135..37473)
DNA (3339bp) protein (1113aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:CBH24815.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24815.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
methylmalonyl-CoA mutase n=1 Tax=Salisaeta longa RepID=UPI0003B46857
bhbA; methylmalonyl-CoA mutase
qh_9_scaffold_28_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37552..38565)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E239D
Uncharacterized protein {ECO:0000313|EMBL:CCH51598.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
helix-turn-helix domain-containing protein
qh_9_scaffold_28_27
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

38677..39171
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W5A1_NEICI
Uncharacterized protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
qh_9_scaffold_28_28
Vibrio sp. HENC-01, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39320..40384
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Vibrio sp. HENC-01 RepID=K5U2L4_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EKM15320.1}; TaxID=992010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. HENC-01.;"
hypothetical protein
qh_9_scaffold_28_29
RLO_PLX_64_10, Bacteria

Not on your lists

40598..42880
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1FIE2_AMPQE
ATPase, AAA domain containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
AAA ATPase central domain protein
qh_9_scaffold_28_30
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(42883..43308)
DNA (426bp) protein (142aa)
PIN domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative uncharacterized protein id=4949716 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PilT protein domain-containing protein
Displaying 30 items

View Taxonomy