ggKbase home page

qh_9_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_9_scaffold_378_1
Synechococcus sp. WH 8016, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3..122
DNA (120bp) protein (40aa)
molybdenum cofactor biosynthesis protein MoeB n=1 Tax=Salisaeta longa RepID=UPI0003B547D4
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EHA59339.1}; TaxID=166318 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH
moeB; molybdopterin biosynthesis protein MoeB
qh_9_scaffold_378_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(221..649)
DNA (429bp) protein (143aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFG3_RHOM4
anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACY47490.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qh_9_scaffold_378_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(954..1325)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF04_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47454.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_9_scaffold_378_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1470..3431)
DNA (1962bp) protein (654aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=24657977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase
qh_9_scaffold_378_5
unknown

Not on your lists

3950..4183
DNA (234bp) protein (78aa)

This feature has no annotations

qh_9_scaffold_378_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4244..5899)
DNA (1656bp) protein (552aa)
Phytoene dehydrogenase {ECO:0000313|EMBL:CBH25197.1}; EC=1.14.99.- {ECO:0000313|EMBL:CBH25197.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Phytoene dehydrogenase n=2 Tax=Salinibacter ruber RepID=D5HAZ2_SALRM
crtI; Phytoene dehydrogenase
qh_9_scaffold_378_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5943..7829)
DNA (1887bp) protein (629aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY49286.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACY49286.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B59069
PAS/PAC sensor hybrid histidine kinase
qh_9_scaffold_378_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8129..9877)
DNA (1749bp) protein (583aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF32_RHOM4
PAS/PAC sensor signal transduction histidine kinase
qh_9_scaffold_378_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9970..11166)
DNA (1197bp) protein (399aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=2 Tax=Salinibacter ruber RepID=AROC_SALRD
aroC; chorismate synthase
qh_9_scaffold_378_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11755..13440)
DNA (1686bp) protein (562aa)
protease Do (EC:3.4.21.108)
Protease Do {ECO:0000313|EMBL:AEN73719.1}; EC=3.4.21.108 {ECO:0000313|EMBL:AEN73719.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
Protease Do n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW1_RHOMR
qh_9_scaffold_378_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13626..14417)
DNA (792bp) protein (264aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW2_RHOMR
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEN73720.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
qh_9_scaffold_378_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14570..15049
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55C59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24245.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_9_scaffold_378_13
unknown

Not on your lists

comp(15217..15531)
DNA (315bp) protein (105aa)

This feature has no annotations

qh_9_scaffold_378_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15574..16476)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME08_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49152.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qh_9_scaffold_378_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16578..17483)
DNA (906bp) protein (302aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:CBH24356.1}; EC=4.1.3.4 {ECO:0000313|EMBL:CBH24356.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8K1_SALRM
mvaB; Hydroxymethylglutaryl-CoA lyase
qh_9_scaffold_378_16
unknown

Not on your lists

comp(17561..17743)
DNA (183bp) protein (61aa)

This feature has no annotations

qh_9_scaffold_378_17
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17765..17986)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5EE34
Uncharacterized protein {ECO:0000313|EMBL:EDN67283.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
qh_9_scaffold_378_18
unknown

Not on your lists

comp(18011..18154)
DNA (144bp) protein (48aa)

This feature has no annotations

qh_9_scaffold_378_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18186..19808)
DNA (1623bp) protein (541aa)
Aminotransferase, class V superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H895_SALRM
aminotransferase class V superfamily protein
Aminotransferase, class V superfamily {ECO:0000313|EMBL:CBH24250.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_9_scaffold_378_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19957..21504
DNA (1548bp) protein (516aa)
magnesium chelatase subunit ChlI family protein; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=24658263 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Magnesium-chelatase subunit chlI {ECO:0000313|EMBL:CBH25466.1}; EC=6.6.1.1 {ECO:0000313|EMBL:CBH25466.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
chlI; Magnesium-chelatase subunit chlI
qh_9_scaffold_378_21
unknown

Not on your lists

comp(21558..21857)
DNA (300bp) protein (100aa)

This feature has no annotations

qh_9_scaffold_378_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22034..22762
DNA (729bp) protein (243aa)
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45251.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC45251.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
glycosyl hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B33BC8
glycosyl transferase family protein
qh_9_scaffold_378_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22876..23874
DNA (999bp) protein (333aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ABC43810.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ABC43810.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
branched-chain amino acid aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B35C5E
ilvE; branched-chain amino acid aminotransferase
qh_9_scaffold_378_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23956..24354)
DNA (399bp) protein (133aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Putative phosphoesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL8_SALRM
phosphoesterase
qh_9_scaffold_378_25
unknown

Not on your lists

24663..24905
DNA (243bp) protein (81aa)

This feature has no annotations

qh_9_scaffold_378_26
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

24942..25172
DNA (231bp) protein (77aa)
site-specific DNA-methyltransferase Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
Site-specific DNA-methyltransferase (Cytosine-N4-specific) id=4758767 bin=GWC2_OP3-like_45_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
site-specific DNA-methyltransferase
qh_9_scaffold_378_27
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25184..25756
DNA (573bp) protein (191aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" sour
hypothetical protein n=1 Tax=Enterococcus faecium RepID=UPI0002DD8CB7
site-specific DNA-methyltransferase
qh_9_scaffold_378_28
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

25720..26058
DNA (339bp) protein (113aa)
site-specific DNA-methyltransferase Tax=GWB2_Planctomycetes_41_19_curated
DNA methylase N-4/N-6 domain protein id=4141722 bin=GWA2_Bacteroidetes_33_15 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
DNA methylase N-4/N-6 domain-containing protein
qh_9_scaffold_378_29
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

26165..27178
DNA (1014bp) protein (338aa)
putative restriction enzyme Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
Putative uncharacterized protein id=3793588 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
putative restriction enzyme
qh_9_scaffold_378_30
unknown

Not on your lists

27293..27472
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

View Taxonomy