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qs_1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_102_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..104
DNA (102bp) protein (34aa)
Transposase {ECO:0000313|EMBL:AHB67640.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_1_scaffold_102_2
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(155..1297)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EF65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46405.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
qs_1_scaffold_102_3
unknown

Not on your lists

comp(1936..3477)
DNA (1542bp) protein (514aa)

This feature has no annotations

qs_1_scaffold_102_4
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3434..3829)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BEM0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09341.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
qs_1_scaffold_102_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3934..6396)
DNA (2463bp) protein (821aa)
Phage tail protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAQ2_9EURY
Phage tail protein {ECO:0000313|EMBL:ELZ32511.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
phage tail protein
qs_1_scaffold_102_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6398..8449)
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32512.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_1_scaffold_102_7
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8450..12046)
DNA (3597bp) protein (1199aa)
Baseplate J-like protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVW3_HALBP
Uncharacterized protein {ECO:0000313|EMBL:ELY91714.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
baseplate J-like protein
qs_1_scaffold_102_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12046..12507)
DNA (462bp) protein (154aa)
GPW/gp25 family protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEF1_9EURY
GPW/gp25 family protein {ECO:0000313|EMBL:ELZ32514.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
phage baseplate outer wedge protein (acidic lysozyme)
qs_1_scaffold_102_9
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12504..12794)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Halovivax RepID=L0I5K6_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB14785.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_1_scaffold_102_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12800..13435)
DNA (636bp) protein (212aa)
Phage-related baseplate assembly protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAQ8_9EURY
Phage-related baseplate assembly protein {ECO:0000313|EMBL:ELZ32516.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
phage tail spike protein
qs_1_scaffold_102_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13437..14489)
DNA (1053bp) protein (351aa)
Phage protein D n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCT2_9EURY
Phage protein D {ECO:0000313|EMBL:ELZ32517.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
phage protein D
qs_1_scaffold_102_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14489..15208)
DNA (720bp) protein (240aa)
Peptidoglycan-binding lysin domain-containing protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LNS8_9EURY
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:EMA35151.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
peptidoglycan-binding lysin domain-containing protein
qs_1_scaffold_102_13
unknown

Not on your lists

comp(15156..16229)
DNA (1074bp) protein (358aa)

This feature has no annotations

qs_1_scaffold_102_14
unknown

Not on your lists

16457..17491
DNA (1035bp) protein (345aa)

This feature has no annotations

qs_1_scaffold_102_15
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17488..19845
DNA (2358bp) protein (786aa)
hypothetical protein n=1 Tax=Enterovibrio calviensis RepID=UPI0003004B38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49801.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
qs_1_scaffold_102_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19987..22101)
DNA (2115bp) protein (705aa)
AAA ATPase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAR3_9EURY
AAA ATPase {ECO:0000313|EMBL:ELZ32521.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
AAA+ family ATPase
qs_1_scaffold_102_17

Not on your lists

comp(22168..22611)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39152.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
conserved hypothetical phage tail region protein
qs_1_scaffold_102_18
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22608..22775)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CA11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19192.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_1_scaffold_102_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22772..23206)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32524.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_1_scaffold_102_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23203..23643)
DNA (441bp) protein (147aa)
Phage tail tube protein gp19 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAM8_9EURY
Phage tail tube protein gp19 {ECO:0000313|EMBL:ELZ32525.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
phage tail tube protein gp19
qs_1_scaffold_102_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23650..26277)
DNA (2628bp) protein (876aa)
Phage tail sheath protein FI n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAR5_9EURY
Phage tail sheath protein FI {ECO:0000313|EMBL:ELZ32526.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
phage tail sheath protein FI
qs_1_scaffold_102_22
unknown

Not on your lists

comp(26509..27288)
DNA (780bp) protein (260aa)

This feature has no annotations

qs_1_scaffold_102_23
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27290..27907)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AVC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ02267.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
qs_1_scaffold_102_24
unknown

Not on your lists

comp(27904..28056)
DNA (153bp) protein (51aa)

This feature has no annotations

qs_1_scaffold_102_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28444..29589)
DNA (1146bp) protein (382aa)
Integrase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSR9_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA48398.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
integrase family protein
qs_1_scaffold_102_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30051..30374
DNA (324bp) protein (108aa)
AbrB family transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F0K9_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ53465.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
AbrB family transcription regulator
qs_1_scaffold_102_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30371..30802
DNA (432bp) protein (144aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F066_9EURY
hypothetical protein
qs_1_scaffold_102_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31051..31164
DNA (114bp) protein (38aa)
Non-histone chromosomal MC1 family protein {ECO:0000313|EMBL:EMA49115.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
qs_1_scaffold_102_trna_1
unknown

Not on your lists

comp(31245..31318)
DNA (74bp)
transferRNA
qs_1_scaffold_102_29
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31605..31913)
DNA (309bp) protein (103aa)
ArsR family transcription regulator n=2 Tax=Halobacterium salinarum RepID=B0R3E9_HALS3
hypothetical protein
ArsR family transcription regulator {ECO:0000313|EMBL:CAP13263.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium
Displaying items 1-30 of 38 in total

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