ggKbase home page

qs_1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 49 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_130_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)
signal peptide protein n=1 Tax=Salisaeta longa RepID=UPI0003B39AFD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG93721.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_1_scaffold_130_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

438..1508
DNA (1071bp) protein (357aa)
AP endonuclease, family 2 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZK2_SALRD
AP endonuclease
AP endonuclease, family 2 {ECO:0000313|EMBL:ABC44076.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_1_scaffold_130_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1878..3989
DNA (2112bp) protein (704aa)
Glycoside hydrolase 97 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM06_NIAKG
glycoside hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycoside hydrolase
qs_1_scaffold_130_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4046..5074)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B653DB
NarL family signal transduction histidine kinase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PAS/PAC sensor hybrid histidine kinase
qs_1_scaffold_130_5
unknown

Not on your lists

comp(5168..5341)
DNA (174bp) protein (58aa)

This feature has no annotations

qs_1_scaffold_130_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5463..7322)
DNA (1860bp) protein (620aa)
sodium transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00036147D7
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACT93825.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sourc
qs_1_scaffold_130_7
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7273..7944)
DNA (672bp) protein (224aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EL35_CORAD
2-dehydro-3-deoxyphosphogluconate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ADE53137.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae
qs_1_scaffold_130_8
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8044..9021)
DNA (978bp) protein (326aa)
2-keto-3-deoxygluconate kinase n=1 Tax=Geobacillus kaustophilus GBlys RepID=U2X4X3_GEOKU
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:GAD13915.1}; TaxID=1337888 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus GBlys.;"
kdgK; 2-keto-3-deoxygluconate kinase
qs_1_scaffold_130_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9363..10301)
DNA (939bp) protein (313aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein n=2 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003709CF2
Dihydrodipicolinate synthase
qs_1_scaffold_130_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10425..11264)
DNA (840bp) protein (280aa)
Short-chain dehydrogenase/reductase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B5W2_9MICO
short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CCE74029.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis s
qs_1_scaffold_130_11
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(11389..12630)
DNA (1242bp) protein (414aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTZ4_VULDI
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADN49791.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vu
qs_1_scaffold_130_12
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12694..13473)
DNA (780bp) protein (260aa)
Transcriptional regulator, GntR family n=3 Tax=Thermoanaerobacter RepID=B0K475_THEPX
GntR family transcriptional regulator Tax=RBG_16_Chloroflexi_58_14_curated
GntR family transcriptional regulator
qs_1_scaffold_130_13

Not on your lists

comp(13737..15257)
DNA (1521bp) protein (507aa)
Marine sediment metagenome DNA, contig: S01H1_S06417 {ECO:0000313|EMBL:GAG13929.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative aminopeptidase id=718895 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
qs_1_scaffold_130_14
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(15341..17461)
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000363135B
beta-galactosidase
Beta-galactosidase {ECO:0000313|EMBL:AHF91435.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
qs_1_scaffold_130_15
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17640..19382)
DNA (1743bp) protein (581aa)
Arylsulfatase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGE86242.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
sulfatase
qs_1_scaffold_130_16
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19485..21059)
DNA (1575bp) protein (525aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9K2_SINAD
arylsulfatase A family protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
arylsulfatase A family protein
qs_1_scaffold_130_17
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21063..21872)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002DFFD18
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ACU96164.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora vir
qs_1_scaffold_130_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21956..22330)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4BE94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48695.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_130_19
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22460..24781)
DNA (2322bp) protein (774aa)
Beta-agarase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2Q4_MELRP
Uncharacterized protein {ECO:0000313|EMBL:KKB47164.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
beta-agarase
qs_1_scaffold_130_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24917..25801)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA8_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD02306.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
qs_1_scaffold_130_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25938..28178)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZJX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61020.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
4Fe-4S binding protein
qs_1_scaffold_130_22
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28227..28772)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IHW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95458.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
hypothetical protein
qs_1_scaffold_130_23
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28769..29329)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B289
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56750.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
qs_1_scaffold_130_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(29647..30633)
DNA (987bp) protein (329aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.29) Tax=RBG_16_Planctomycetes_55_9_curated
glycerate dehydrogenase n=1 Tax=Paenibacillus elgii RepID=UPI000248DA17
glycerate dehydrogenase
qs_1_scaffold_130_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30711..32936)
DNA (2226bp) protein (742aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGU3_RHOMR
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:AEN74090.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_1_scaffold_130_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33114..34589)
DNA (1476bp) protein (492aa)
Rhamnulokinase (EC:2.7.1.5)
Carbohydrate kinase FGGY n=2 Tax=Rhodothermus marinus RepID=D0MFR4_RHOM4
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACY47591.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_1_scaffold_130_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34884..36200)
DNA (1317bp) protein (439aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGU5_RHOMR
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEN74092.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_1_scaffold_130_28
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(36360..36557)
DNA (198bp) protein (66aa)
id=24418883 Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
qs_1_scaffold_130_29
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(36665..38167)
DNA (1503bp) protein (501aa)
transmembrane prediction Tax=RBG_16_Aminicenantes_66_30_curated
transmembrane prediction id=24418882 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
transmembrane prediction
qs_1_scaffold_130_30
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38373..39512)
DNA (1140bp) protein (380aa)
Sulphatase-modifying factor protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB82_RUNSL
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEI46583.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (stra
Displaying items 1-30 of 49 in total

View Taxonomy