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qs_1_scaffold_1301

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1301_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..514
DNA (513bp) protein (171aa)
major facilitator superfamily transporter id=24628759 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Arabinose efflux permease {ECO:0000313|EMBL:ERG91502.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07H
major facilitator superfamily transporter
qs_1_scaffold_1301_2

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comp(516..1700)
DNA (1185bp) protein (395aa)
Alcohol dehydrogenase, class IV n=1 Tax=uncultured archaeon A07HB70 RepID=V4XZC7_9ARCH
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:ESS07663.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
iron-containing alcohol dehydrogenase
qs_1_scaffold_1301_3

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comp(1759..2637)
DNA (879bp) protein (293aa)
2,3-dimethylmalate lyase {ECO:0000313|EMBL:ESS06809.1}; EC=4.1.3.32 {ECO:0000313|EMBL:ESS06809.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
PEP phosphonomutase-like enzyme (EC:4.1.3.32)
2,3-dimethylmalate lyase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFF6_9ARCH
qs_1_scaffold_1301_4

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2819..3898
DNA (1080bp) protein (360aa)
AP superfamily protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3V3_9ARCH
AP superfamily protein {ECO:0000313|EMBL:ESS07326.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
phosphonoacetate hydrolase
qs_1_scaffold_1301_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3944..5146
DNA (1203bp) protein (401aa)
Major facilitator superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N673_9EURY
Nitrate/nitrite transporter {ECO:0000313|EMBL:AKH97479.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeu
sugar transporter
qs_1_scaffold_1301_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5143..5550)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27836.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_1_scaffold_1301_7

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comp(5666..7273)
DNA (1608bp) protein (536aa)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=uncultured organism RepID=M1PWP6_9ZZZZ
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:AGF93569.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
thiamine pyrophosphate-dependent enzyme, putative carboligase or decarboxylase
qs_1_scaffold_1301_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7395..8333
DNA (939bp) protein (313aa)
2-D-hydroxyacid dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCL1_9EURY
2-D-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EMA42409.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
2-D-hydroxyacid dehydrogenase
qs_1_scaffold_1301_9

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8361..11384
DNA (3024bp) protein (1008aa)
FAD/FMN-containing dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3W7_9ARCH
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:ESS07341.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
FAD/FMN-dependent dehydrogenase
qs_1_scaffold_1301_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11470..11976
DNA (507bp) protein (169aa)
aceB; malate synthase (EC:4.1.3.34)
Malate synthase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H774_9EURY
Malate synthase {ECO:0000313|EMBL:ELZ79562.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
qs_1_scaffold_1301_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11924..12739
DNA (816bp) protein (272aa)
Malate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUZ1_HALVA
Malate synthase {ECO:0000313|EMBL:EMA11465.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;
aceB; malate synthase
qs_1_scaffold_1301_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12786..14132)
DNA (1347bp) protein (449aa)
Hydroxypyruvate reductase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BLM7_9EURY
Hydroxypyruvate reductase {ECO:0000313|EMBL:ELZ11387.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans
putative glycerate kinase
qs_1_scaffold_1301_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14845..16080)
DNA (1236bp) protein (412aa)
Major facilitator superfamily transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1M4_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EMA50580.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
major facilitator superfamily transporter
qs_1_scaffold_1301_14
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16244..16711
DNA (468bp) protein (156aa)
MOSC domain containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBS8_9EURY
Sulfurase {ECO:0000313|EMBL:KDE60406.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
MOSC domain containing protein
qs_1_scaffold_1301_15
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16891..17835
DNA (945bp) protein (315aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1K2_NATMM
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADD07461.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrial
qs_1_scaffold_1301_16
unknown

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18012..18257
DNA (246bp) protein (82aa)

This feature has no annotations

qs_1_scaffold_1301_17

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18699..18896
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGS8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07354.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qs_1_scaffold_1301_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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19476..20582
DNA (1107bp) protein (369aa)
Site-specific recombinase XerD n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRU2_HALBP
site-specific recombinase xerd
Site-specific recombinase XerD {ECO:0000313|EMBL:ADQ66879.1}; Site-specific recombinase xerd {ECO:0000313|EMBL:ELY30386.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
qs_1_scaffold_1301_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(20677..21411)
DNA (735bp) protein (245aa)
Integrase family protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VS65_9EURY
Integrase family protein {ECO:0000313|EMBL:ELY39901.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.
site-specific recombinase XerC
qs_1_scaffold_1301_20
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(22368..22700)
DNA (333bp) protein (111aa)
Integrase family protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8N1_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA65909.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;
XerC/D-like integrase
qs_1_scaffold_1301_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23088..23531)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG46_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44328.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_1_scaffold_1301_22
unknown

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23677..23949
DNA (273bp) protein (91aa)

This feature has no annotations

qs_1_scaffold_1301_23
unknown

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comp(24340..24510)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 23 items

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