ggKbase home page

qs_1_scaffold_2668

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2668_1
unknown

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_1_scaffold_2668_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(241..417)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITV8_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48425.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_2668_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(457..747)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITV9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48424.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_2668_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1253..1615)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18G81_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ53019.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qs_1_scaffold_2668_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1704..3041
DNA (1338bp) protein (446aa)
IS1341-type transposase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS90_NATPD
IS1341-type transposase
IS1341-type transposase ISNph30 {ECO:0000313|EMBL:CAI48998.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
qs_1_scaffold_2668_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3062..3361)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NDP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG95125.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_1_scaffold_2668_7
unknown

Not on your lists

comp(3358..3501)
DNA (144bp) protein (48aa)

This feature has no annotations

qs_1_scaffold_2668_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3513..4085)
DNA (573bp) protein (191aa)
entB2; isochorismatase (EC:3.3.2.1)
Isochorismatase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KXY0_9EURY
Isochorismatase {ECO:0000313|EMBL:EMA25084.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;"
qs_1_scaffold_2668_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4174..5637
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN3_NATM8
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ38024.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_2668_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5668..6819
DNA (1152bp) protein (384aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:CAI48678.1}; EC=6.3.4.21 {ECO:0000313|EMBL:CAI48678.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
Nicotinate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT56_NATPD
qs_1_scaffold_2668_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7565..8017
DNA (453bp) protein (151aa)
Acetyltransferase including N-acetylase of ribosomal protein-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M205_9EURY
Acetyltransferase including N-acetylase of ribosomal protein-like protein {ECO:0000313|EMBL:EMA38430.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
hypothetical protein
qs_1_scaffold_2668_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8161..9270)
DNA (1110bp) protein (370aa)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CAI48661.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAI48661.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT73_NATPD
pepB_3; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 3
qs_1_scaffold_2668_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9450..10718)
DNA (1269bp) protein (423aa)
Saccharopine dehydrogenase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EY16_9EURY
Saccharopine dehydrogenase {ECO:0000313|EMBL:ELZ52600.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC
saccharopine dehydrogenase
qs_1_scaffold_2668_14
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10821..11018)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA58473.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
qs_1_scaffold_2668_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11123..12766)
DNA (1644bp) protein (548aa)
Nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3EUX6_9EURY
nirA2; probable sulfite/nitrite reductase (ferredoxin)
Nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein {ECO:0000313|EMBL:EJN58277.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
qs_1_scaffold_2668_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12850..13194)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ70_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36263.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_2668_17
unknown

Not on your lists

comp(13191..13367)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_1_scaffold_2668_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13478..13612
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y189_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36264.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_2668_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13657..14208
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT67_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48667.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_2668_trna_1
unknown

Not on your lists

14266..14339
DNA (74bp)
transferRNA
qs_1_scaffold_2668_20
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14645..17161)
DNA (2517bp) protein (839aa)
PAS-PAC-PAC sensing histidine kinase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZS1_9EURY
Blue-light photoreceptor {ECO:0000313|EMBL:CQR50886.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
fixL; PAS-PAC-PAC sensing histidine kinase
qs_1_scaffold_2668_21
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17158..18657)
DNA (1500bp) protein (500aa)
Circadian clock protein, KaiC n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC31_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ56184.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
cirC; KaiC-type circadian regulator Circ3
qs_1_scaffold_2668_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18721..19911
DNA (1191bp) protein (397aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ8_NATPD
tp20; major facilitator family multidrug efflux transporter tetracyclin resistance protein
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI48535.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_1_scaffold_2668_23
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19949..20527)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1Q9G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH03253.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
qs_1_scaffold_2668_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20527..21822)
DNA (1296bp) protein (432aa)
ABC transporter n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UUW3_HALBP
ABC transporter
ABC transporter {ECO:0000313|EMBL:ELY28715.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain
Displaying 25 items

View Taxonomy