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qs_1_scaffold_2752

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2752_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..888
DNA (888bp) protein (296aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=24657306 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase
qs_1_scaffold_2752_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1167..1628
DNA (462bp) protein (154aa)
dksA; DnaK suppressor protein
dksA; DnaK suppressor protein id=24657307 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative RNA polymerase-binding protein DksA {ECO:0000313|EMBL:ABC45591.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_1_scaffold_2752_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1697..2305
DNA (609bp) protein (203aa)
ruvA; Holliday junction DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=24657308 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; Holliday junction DNA helicase RuvA
qs_1_scaffold_2752_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2506..3483
DNA (978bp) protein (326aa)
prs; ribose-phosphate pyrophosphokinase 1; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=24657309 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribose-phosphate pyrophosphokinase 1 {ECO:0000313|EMBL:CBH23456.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CBH23456.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
prs; ribose-phosphate pyrophosphokinase 1
qs_1_scaffold_2752_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3736..4188
DNA (453bp) protein (151aa)
deoxycytidine triphosphate deaminase
deoxycytidine triphosphate deaminase id=24657311 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:ABC44891.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_1_scaffold_2752_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4287..5024
DNA (738bp) protein (246aa)
hypothetical protein
hypothetical protein id=24657313 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23460.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_2752_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5507..7789
DNA (2283bp) protein (761aa)
ferrichrome-iron receptor n=1 Tax=Salisaeta longa RepID=UPI0003B57B2F
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADZ79231.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingob
qs_1_scaffold_2752_8
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8001..9764
DNA (1764bp) protein (588aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F180
Uncharacterized protein {ECO:0000313|EMBL:EQB10671.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
iron-regulated membrane protein
qs_1_scaffold_2752_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9916..12036
DNA (2121bp) protein (707aa)
outer membrane receptor for transport of vitamin B; K02014 iron complex outermembrane recepter protein id=24658671 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
outer membrane receptor for transport of vitamin B
Outer membrane receptor for transport of vitamin B, putative {ECO:0000313|EMBL:ABC46306.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_2752_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12094..12723
DNA (630bp) protein (210aa)
hypothetical protein id=24658672 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72962.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_2752_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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12999..14663
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71491
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
cobalamin (vitamin B12) biosynthesis CbiX protein
qs_1_scaffold_2752_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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14700..15395
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCV9_SALRM
smtA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25864.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_2752_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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16022..17029
DNA (1008bp) protein (336aa)
ilvA; serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=24659215 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ilvA; serine/threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:ABC46151.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_1_scaffold_2752_14

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comp(17095..18555)
DNA (1461bp) protein (487aa)
GHF43 protein n=1 Tax=uncultured bacterium G2_7 RepID=G9IS44_9BACT
GHF43 protein {ECO:0000313|EMBL:AEW47967.1}; TaxID=1112296 species="Bacteria; environmental samples.;" source="uncultured bacterium G2_7.;"
heparan N-sulfatase
qs_1_scaffold_2752_15
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18694..19758)
DNA (1065bp) protein (355aa)
glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5059
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AGC42264.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stip
qs_1_scaffold_2752_16
unknown

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comp(20049..20567)
DNA (519bp) protein (173aa)

This feature has no annotations

Displaying 16 items

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