ggKbase home page

qs_1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_39_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..568
DNA (567bp) protein (189aa)
Signal peptidase I n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXQ2_9EURY
Signal peptidase I {ECO:0000313|EMBL:EFW90603.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX
peptidase S26B, signal peptidase
qs_1_scaffold_39_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(678..2168)
DNA (1491bp) protein (497aa)
ORC1-type DNA replication protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXN8_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
orc1/cdc6 family replication initiation protein
qs_1_scaffold_39_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4003..4644
DNA (642bp) protein (214aa)
GTP-binding like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXP1_9EURY
GTP-binding like protein {ECO:0000313|EMBL:EFW90592.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
GTP-binding protein HSR1-related
qs_1_scaffold_39_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4649..5038
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ46_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11790.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qs_1_scaffold_39_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5038..5781
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29343.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_39_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5867..7345
DNA (1479bp) protein (493aa)
Efflux protein, mate family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NST0_HALBP
efflux protein, mate family
Efflux protein, mate family {ECO:0000313|EMBL:ELY26820.1}; Putative efflux protein, MATE family {ECO:0000313|EMBL:ADQ65818.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
qs_1_scaffold_39_7
unknown

Not on your lists

7385..7477
DNA (93bp) protein (31aa)

This feature has no annotations

qs_1_scaffold_39_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7477..8247
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CBL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19299.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_1_scaffold_39_9
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8549..8791)
DNA (243bp) protein (81aa)
Ferredoxin n=2 Tax=Haloferax RepID=M0HYM9_9EURY
ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:CQR49184.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
qs_1_scaffold_39_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9010..11667)
DNA (2658bp) protein (886aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BVK1_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ14137.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halo
PAS sensor protein
qs_1_scaffold_39_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11794..14043
DNA (2250bp) protein (750aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
hel308a; ATP-dependent DNA helicase Hel308 (EC:3.6.4.12)
Putative ski2-type helicase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXN4_9EURY
qs_1_scaffold_39_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14075..14590
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZD5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46821.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_39_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14668..15045
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90583.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_1_scaffold_39_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15581..16702
DNA (1122bp) protein (374aa)
Site-specific recombinase XerD {ECO:0000313|EMBL:ESP88364.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
site-specific recombinase XerD id=24615195 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
integrase family protein
qs_1_scaffold_39_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16869..17888
DNA (1020bp) protein (340aa)
Membrane associated histidine kinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KVJ2_9EURY
Membrane associated histidine kinase {ECO:0000313|EMBL:EMA25322.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amy
htlD; Htr-like protein
qs_1_scaffold_39_16
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18321..18683)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AFQ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY97226.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
qs_1_scaffold_39_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18952..22479
DNA (3528bp) protein (1176aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1H9_9EURY
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELY67521.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema
GAF sensor signal transduction histidine kinase
qs_1_scaffold_39_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22884..23660
DNA (777bp) protein (259aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYS9_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ27572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
AsnC family transcriptional regulator
qs_1_scaffold_39_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23936..24853
DNA (918bp) protein (306aa)
Cationic amino acid transporter, putative n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSK7_9EURY
Cationic amino acid transporter, putative {ECO:0000313|EMBL:EFW92416.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
cat3; cationic amino acid transporter
qs_1_scaffold_39_20
unknown

Not on your lists

24856..25101
DNA (246bp) protein (82aa)

This feature has no annotations

qs_1_scaffold_39_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25217..25918
DNA (702bp) protein (234aa)
K+ transporter, NAD-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYF3_9EURY
K+ transporter, NAD-binding protein {ECO:0000313|EMBL:EJN60367.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
k+ transporter, NAD-binding protein
qs_1_scaffold_39_22
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25961..26233
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZZF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY91729.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
ABC-type uncharacterized transport system, permease component
qs_1_scaffold_39_trna_1
unknown

Not on your lists

comp(26835..26907)
DNA (73bp)
transferRNA
qs_1_scaffold_39_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27051..27626
DNA (576bp) protein (192aa)
IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D2V0_HALXS
qs_1_scaffold_39_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27678..28337
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatu
Phosphodiesterase, MJ0936 family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNQ5_9EURY
DNA repair protein
qs_1_scaffold_39_25

Not on your lists

comp(28431..29435)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A1T4_9ACTN
Marine sediment metagenome DNA, contig: S01H1_L00678 {ECO:0000313|EMBL:GAF68638.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
qs_1_scaffold_39_26
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29709..30623)
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000313|EMBL:ELZ21666.1}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000313|EMBL:ELZ21666.1};; TaxID=1227488 species="Archaea; Euryar
Malate dehydrogenase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CEH1_9EURY
lactate/malate dehydrogenase
qs_1_scaffold_39_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30784..31500
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93692.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_1_scaffold_39_28
unknown

Not on your lists

comp(31612..31911)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_1_scaffold_39_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32088..34499)
DNA (2412bp) protein (804aa)
Hef nuclease n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP36_9EURY
Hef nuclease {ECO:0000313|EMBL:EFW93689.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
ERCC4 domain-containing protein
Displaying items 1-30 of 41 in total

View Taxonomy