ggKbase home page

qs_1_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 55 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_602_1
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

844..1374
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMN4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50476.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_1_scaffold_602_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1384..3231
DNA (1848bp) protein (616aa)
Rad50 ATPase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WM60_9EURY
Rad50 ATPase {ECO:0000313|EMBL:ELY50477.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 1
hypothetical protein
qs_1_scaffold_602_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3268..3669)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWM8_9EURY
aromatic ring hydroxylating enzyme
Aromatic ring hydroxylating enzyme {ECO:0000313|EMBL:AHF99624.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola lars
qs_1_scaffold_602_4
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3666..4277)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX00_9EURY
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHF99623.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
qs_1_scaffold_602_5
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4270..4740)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CRV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24604.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
amidohydrolase
qs_1_scaffold_602_6
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4800..5270)
DNA (471bp) protein (157aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_8_curated
qs_1_scaffold_602_7
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5762..6346
DNA (585bp) protein (195aa)
Alkylhydroperoxidase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XQK3_9EURY
Alkylhydroperoxidase {ECO:0000313|EMBL:ELY64035.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.
hypothetical protein
qs_1_scaffold_602_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6523..7590
DNA (1068bp) protein (356aa)
Amidohydrolase 2 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQ39_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EMA59743.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
amidohydrolase 2
qs_1_scaffold_602_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7593..7946
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DED6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32499.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
aromatic ring hydroxylating enzyme
qs_1_scaffold_602_10
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7846..9663)
DNA (1818bp) protein (606aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1D4_9EURY
Acyl-CoA synthetase/AMP-acid ligase {ECO:0000313|EMBL:ELZ17071.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena ther
hypothetical protein
qs_1_scaffold_602_11
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9899..10777)
DNA (879bp) protein (293aa)
3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Natronorubrum tibetense RepID=L9W393_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY43761.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
3-hydroxyacyl-CoA dehydrogenase
qs_1_scaffold_602_12
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10842..11234)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VL08_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY37751.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qs_1_scaffold_602_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11231..12409)
DNA (1179bp) protein (393aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase 8 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1S1_9EURY
Acetyl-CoA C-acyltransferase 8 {ECO:0000313|EMBL:EMA50640.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
qs_1_scaffold_602_14
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12498..13268)
DNA (771bp) protein (257aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY49043.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELY49043.1};; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WL35_9EURY
short-chain dehydrogenase/reductase SDR
qs_1_scaffold_602_15
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13534..14862
DNA (1329bp) protein (443aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUX1_HALVD
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:ADE03945.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteri
livJ6; branched-chain amino acid ABC transporter substrate-binding protein
qs_1_scaffold_602_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14871..15746
DNA (876bp) protein (292aa)
Permease component of ABC transporter protein n=3 Tax=Bordetella bronchiseptica RepID=K0MIJ4_BORBM
ABC transporter permease
Putative urea ABC transporter, permease protein UrtB {ECO:0000313|EMBL:KDD53212.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
qs_1_scaffold_602_17
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15743..16792
DNA (1050bp) protein (350aa)
Inner-membrane translocator n=1 Tax=Marinobacter algicola DG893 RepID=A6EW73_9ALTE
Inner-membrane translocator {ECO:0000313|EMBL:EDM49260.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter
inner-membrane translocator
qs_1_scaffold_602_18
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16845..17594
DNA (750bp) protein (250aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE21_HALRX
ABC-type branched-chain amino acid transport systems, ATPase component
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AGB17014.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax
qs_1_scaffold_602_19
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17587..18288
DNA (702bp) protein (234aa)
ABC transporter n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C6Y9_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ18985.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
branched-chain amino acid ABC transporter ATPase
qs_1_scaffold_602_20
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18459..18938
DNA (480bp) protein (160aa)
AsnC-type transcription regulator n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ64_9EURY
AsnC-type transcription regulator {ECO:0000313|EMBL:ELY50478.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
hypothetical protein
qs_1_scaffold_602_21
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18968..20170)
DNA (1203bp) protein (401aa)
peroxidase (EC:1.11.1.7)
cytochrome P450 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE675
Peroxidase {ECO:0000313|EMBL:EHK82461.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
qs_1_scaffold_602_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20266..20748)
DNA (483bp) protein (161aa)
hbd2; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU82_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EFW92161.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
qs_1_scaffold_602_23
unknown

Not on your lists

comp(20690..21013)
DNA (324bp) protein (108aa)

This feature has no annotations

qs_1_scaffold_602_24
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21010..21699)
DNA (690bp) protein (230aa)
Inner-membrane translocator n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LEK6_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA32002.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
inner-membrane translocator
qs_1_scaffold_602_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22039..22905)
DNA (867bp) protein (289aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPJ7_9EURY
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:EFW93480.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
branched-chain amino acid ABC transporter permease
qs_1_scaffold_602_26
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23050..23796
DNA (747bp) protein (249aa)
ABC transporter related n=1 Tax=Salinispora arenicola (strain CNS-205) RepID=A8LXW0_SALAI
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABV97677.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-2
qs_1_scaffold_602_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23793..24485
DNA (693bp) protein (231aa)
ABC transporter-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLV9_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:ELZ24260.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
ABC transporter
qs_1_scaffold_602_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24500..26020)
DNA (1521bp) protein (507aa)
AMP-dependent synthetase/ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCM5_HALMO
AMP-dependent synthetase/ligase {ECO:0000313|EMBL:EMA42155.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
AMP-dependent synthetase and ligase
qs_1_scaffold_602_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26114..27382)
DNA (1269bp) protein (423aa)
Amino acid-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHX6_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:EMA45306.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
qs_1_scaffold_602_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27453..27851)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46299.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying items 1-30 of 55 in total

View Taxonomy