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qs_1_scaffold_3182

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_3182_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(67..372)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52958.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
qs_1_scaffold_3182_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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704..1294
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase I, F subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ67_9EURY
Putative NADH dehydrogenase I, F subunit {ECO:0000313|EMBL:EMA37649.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
qs_1_scaffold_3182_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1181..1915)
DNA (735bp) protein (245aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L6I4_9EURY
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EMA28024.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma la
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
qs_1_scaffold_3182_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2087..2272
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL4_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48782.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_3182_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2273..2539
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJJ7_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122748
elongation factor 1-beta
qs_1_scaffold_3182_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2985..3305
DNA (321bp) protein (107aa)
50S ribosomal protein L21e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ63_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
qs_1_scaffold_3182_7
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3302..3658
DNA (357bp) protein (119aa)
hypothetical protein (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELY57920.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELY57920.1};; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
DNA-directed RNA polymerase subunit F n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X865_9EURY
qs_1_scaffold_3182_8
unknown

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comp(4028..4306)
DNA (279bp) protein (93aa)

This feature has no annotations

qs_1_scaffold_3182_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4403..4675)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8S7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53489.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_3182_10
unknown

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comp(4805..4936)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_1_scaffold_3182_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4933..6432)
DNA (1500bp) protein (500aa)
Sodium-solute symporter putative n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFH2_HALVA
sodium:proline symporter
Sodium-solute symporter putative {ECO:0000313|EMBL:EMA06754.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
qs_1_scaffold_3182_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6704..7009)
DNA (306bp) protein (102aa)
tenA-2; transcriptional activator TenA (EC:3.5.99.2)
Transcriptional activator TenA {ECO:0000313|EMBL:AFK21126.1}; EC=3.5.99.2 {ECO:0000313|EMBL:AFK21126.1};; Transcriptional regulator {ECO:0000313|EMBL:AHZ24289.1}; TaxID=523841 species="Archaea; Euryar
Transcriptional activator TenA n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RA66_HALMT
qs_1_scaffold_3182_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8734..9249
DNA (516bp) protein (172aa)
Membrane-flanked domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHE6_9EURY
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:EMA44114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
membrane-flanked domain-containing protein
qs_1_scaffold_3182_14
unknown

Not on your lists

9389..9676
DNA (288bp) protein (96aa)

This feature has no annotations

qs_1_scaffold_3182_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9603..10676)
DNA (1074bp) protein (358aa)
ABC transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N371_9EURY
ABC transporter {ECO:0000313|EMBL:EMA51539.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.
ABC transporter
qs_1_scaffold_3182_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10714..11313)
DNA (600bp) protein (200aa)
Corrinoid ABC transporter permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N215_9EURY
Corrinoid ABC transporter permease {ECO:0000313|EMBL:EMA45646.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
btuC; ABC-type transport system permease protein (probable substrate cobalamin)
Displaying 16 items

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